| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_1591 |
|---|
| Symbol | |
|---|
| ID | 9145477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | + |
|---|
| Start bp | 1768957 |
|---|
| End bp | 1770519 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | UDP-N-acetylmuramyl-tripeptide synthetase |
|---|
| Protein accession | YP_003636688 |
|---|
| Protein GI | 296129438 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.51189 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.415105 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCCC CCCTGGGCCG GCTCCGTCCC GAGCGCCCGC CGGTCCGCAG GGTCGAGGAC
CTCGCGGCCG ACCTCGACCT CGTGACCGTC GGCGCCCCGG CTGCCGGACT GACCTTCACC
GGCGTGACGA TGTCGAGCAC CGACGTCGAA CCGGGCGACC TGTTCGTGGC CGTCCCGGGC
CTGAAGGTGC ACGGTGCGCG GTTCGCGGCC GACGCGGTCG CGCGTGGCGC GGTCGCCGTG
CTCACGGACG ACGACGGTGT GGCGGCGGTC CCGCCGGACG TGCCCGTGCT CGTCGCCCAC
GACCCGCGGT CGCTCGCCGG GCCGGTCGCG TCGTGGGCGC TGGGGAACCC TGCGTCCCGG
CTCGTGACCG TGGGCGTGAC AGGGACCAAC GGCAAGACCA CGACGACGTA CTTCGTCGAC
GCGGCGCTGC GCGCGCACCA CGCACGGACC GCGGTGCTCG GCACCGTCGA GCTGCGGATC
GGCGACGACG CCGTGGAGAG CCCGCGCACC ACGGTCGAGG CCCCCGTGCT GCAGGCGCTG
CTGGCCGTCG CCCACGAACG CGGCGCCGGG GCCCTGACCA CCGAGGTGTC GTCGCACGCG
CTCGCGCTCG GTCGCGTGCT CGGCACGCGC TTCGACGTCG TCGGGTTCAC CAACCTGCAG
CGCGACCACC TCGACTTCCA CGGCGACATG GAGGGGTACT TCCGCGACAA GGCGCGGCTG
TTCGCCCCCG AGCAGGCGCG GCGGGGCGTC GTGGTGGTCG ACGACGCGTG GGGCCGTCGG
CTGGCCGAGG AGGCGGCGAT CCCCGTCGAG ACCGTGAGCA CGCACGTCGG CGCCCCCGAG
GCGGCCGGCG CCACGTGGGC GGTCGTCGAG GCGGACGTGG GGCTCGACGG CGTCGGGTCG
CGGTTCGTGC TGCGTGGCCC CGACGGCGCG CGGCACGTGG CGCACAGCCC GCTGCCCGGC
CTGGTCAACG TGTCGAACGC CGCGCTCGCG ATCGTGCTCG CGCACGCCGC AGGCGTCCCG
CTGGCCACCG CGATCGAGGC GGTCGGGGGC GCCCACGCGA TCCCGGGGCG CATGGAGCGC
GTCGTCGAAC GCGGGGACGG CTGGCCGCTG TGCCTCGTCG ACTACGCGCA CACGCCCGAC
GCGCTCGTGC TCGCCCTCGA GGCCGTGCGA CCCATCACGC CCGGGCGCCT CGTCATCGTG
TTCGGGTCCG ACGGCGACCG GGACCGCGGC AAGCGCCCGA TCATGGGGGA GATCGCCGCG
CGCCTCGCCG ACGTCCTCGT CGTCACCGAC GAGAACCCGC GCTCGGAGGA CCCCGCGTCC
GTCCGGGCCG CCATCCTCGC GGGCGTGCGC GACGTGCGCC CCGACCTGGC CGACGTGCAC
GAGGCGACCA GTCGTGCGCA GGCCATCCGC GACGCCCTTC GTCTGGCAGG TCCGGACGAC
ACCGTGATCG TCACGGGCAA GGGCCACGAG CCGACCCAGG AGATCGCCGG CGTGTTCCAC
CGCTACAACG ACCGTGACGT GTTCCTCGCG GCCCGCGCCG AGGGCCGGGA GCAGCCCGCG
TGA
|
|---|
| Protein sequence | MTSPLGRLRP ERPPVRRVED LAADLDLVTV GAPAAGLTFT GVTMSSTDVE PGDLFVAVPG
LKVHGARFAA DAVARGAVAV LTDDDGVAAV PPDVPVLVAH DPRSLAGPVA SWALGNPASR
LVTVGVTGTN GKTTTTYFVD AALRAHHART AVLGTVELRI GDDAVESPRT TVEAPVLQAL
LAVAHERGAG ALTTEVSSHA LALGRVLGTR FDVVGFTNLQ RDHLDFHGDM EGYFRDKARL
FAPEQARRGV VVVDDAWGRR LAEEAAIPVE TVSTHVGAPE AAGATWAVVE ADVGLDGVGS
RFVLRGPDGA RHVAHSPLPG LVNVSNAALA IVLAHAAGVP LATAIEAVGG AHAIPGRMER
VVERGDGWPL CLVDYAHTPD ALVLALEAVR PITPGRLVIV FGSDGDRDRG KRPIMGEIAA
RLADVLVVTD ENPRSEDPAS VRAAILAGVR DVRPDLADVH EATSRAQAIR DALRLAGPDD
TVIVTGKGHE PTQEIAGVFH RYNDRDVFLA ARAEGREQPA
|
|---|
| |