| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_1515 |
|---|
| Symbol | |
|---|
| ID | 9145401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | + |
|---|
| Start bp | 1681839 |
|---|
| End bp | 1685141 |
|---|
| Gene Length | 3303 bp |
|---|
| Protein Length | 1100 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | glycoside hydrolase family 9 |
|---|
| Protein accession | YP_003636612 |
|---|
| Protein GI | 296129362 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTTTCTC GAAGGACGCG CCGCGGACTG CGCGCCGCGA CAGCCATCAC CAGTGCGGGC
GTTCTCGCCG CGATCGGGCT GCTGCCCGCA GTCGCGGCGG TCGACGACGC CTTCGACGAC
GGGCCGGGCG CGTGGATCGC GTACGGCACC GACGGGGACA TCGACACCAG CTCCGGCGCG
CTCTGCGTCG ACGTGCCGGC CGGCTCCGCG CAGTACGGCG TGGGCGTCGT GCTGAACGGC
GTGGCCGTGG AGGAGGGCGC GACCTACACG TTCGCGTACA CCGCGAGCGC CTCGACGGAC
GTGACCATCC GGGCCCTCGT GGGCCAGAAC GGCGCGCCCT ACGGCACCGT GCTCGACACG
ACGCCGGCCC TGACCGCCGA GCCGACGGCC GTCGAGGAGA CGTTCACCGC CTCCGCGTCC
TACCCCGCCA CGGCGACCGA CGAGTCCCCC GAGGGGCAGA TCGCGTTCCA GCTCGGCGGC
TTCAGCGACG ACGCGTGGAC CTTCTGCCTC GACGACGTGT CGCTGAGCAG CGAGAGCGAG
CTGCTGCCGC ACACGTCGTT CGCCGAGGGG CTGGGCCCGT GGGGCCTGTA CGGCACGGGC
GACCCGGTCT TCGCGGACGG CGAGATGTGC GTCGAGGTCC CCGGGGGGTA CAGCAACCCG
TGGGACGCCG GCCTGTCGTT CACCGGCCTG CCGATCGAGG AGGGCGAGAA CTACGTCCTC
ACGCTCACCG GCCGCACCGA GCCGGCGACG CCCGTGCGCG TCATCGTCGG CGAGGGCGGT
GGCACCTACC GCATGGTGCT CGAGCAGTCG TCCGCGCCGC TGGGCACCGA GGCGACCACG
CTCACCTACC CGTTCACCGC GAACACGTCC TTCCCGGCGG ACGGCGACGC GCCCGGCCAG
GTGGCGATCC ACCTCGGCAA GACCGCGGGC TACACCTTCT GCCTCTCGGA GGTCTCGTTG
AGCACGTCCG CCACGCCGCC GCCACCCTAC GAGCCGGACA CCGGCCCGCG CGTGCGCGTC
AACCAGGTGG GCTACCTGCC GTTCGGCCCG AAGCGCGCGA CGCTCGTCAC CGACGCGACC
GAGGCGGTCG CGTGGCAGCT CCTCGGCGCC GACGGCGACG AGGTGGCCGA CGGTGAGTCG
CAGCCGGTGG GCGCCGACGC GTCCTCGGGC GAGAACGTGC ACGTCATCGA CTTCTCCGAC
GTCACGGCGA CCGGCGAGGG GCTGACGCTC GTGGCCGACG GCGAGACGAG CCACCCCTTC
GCGATCGACG CGGACCTCTA CGCGCAGCTG CGGTACGACG CGCTGAACTA CTTCTACCTC
GCGCGCTCGG GCATCGACAT CGAGGCGTCC ATCGTGGGGG AGGAGTACGC ACGAGAGGCC
GGTCACGTGG GCGTCGCTCC GAACCAGGGC GACACCGAGG TGCCCTGCAT CGGTCCGCGT
GACTACTACG ACGGCTGGAC CTGCGACTAC ACGCTCGACG TCACCGGCGG CTGGTACGAC
GCCGGTGACC ACGGCAAGTA CGTCGTCAAC GGCGGCATCT CCGTCGCCCA GCTCCTGGCG
ACCTACGAGC GCACGCTGCA CGTCGAGGGC GCGTCCACCG AGGCACTGGC CGACGGGACG
CTGAACCTCC CCGAGCACGG CAACGGCGTG CCCGACGTGC TCGACGAGGC GCGCTGGGAG
CTGGAGTGGA TGCTGAAGAT GGTGGCGCCG TCCGGTGAGT ACGCCGGCAT GGTGCACCAC
AAGATCCACG ACGAGGGCTG GACCGGTCTG CCGCTCATGC CGGCGGACGA CCCGCAGGCG
CGCTCGCTGC ACCGTCCCTC GACGGCGGCG ACGCTCAACC TGGCGGCCGT GGCCGCGCAG
GGCGCCCGAC TGTTCAGCGA GTACGACCAG GAGTTCGCCG ACACGCTGCT GGCCGTGGCG
CGCAGCACGT ACGAGGCGGC GCTCGCGCAC CCCGACGTGT ACGCGCCGGG TGCCGCGGGC
AGCGACGGCG GTGGCCCGTA CGACGACTCC GACGTGTCGG ACGAGTTCTA CTGGGCGGCG
GCCGAGCTGT ACGTCACGAC CGGTGAGGCG CGCTACGCCA CGGACCTCAC GGCCAACCCG
CACCACACGG GCGACGTCTT CCCGGCCGGC GGCTTCTACT GGGGCGGCGT GGCCGCACTG
GGCCGGCTGA CGCTCGCGAC CGTGCCCAAC GACCTGCCCG ACCGTGACGA GGTGCAGGCG
TCGGTCGTCG CGGCCGCCGG CCGGTACGTC GCCGCGCAGC AGGAGCACCC CTGGGGCTCG
GTCTACTCGC CCGACGGCGG CGTGTACGCC TGGGGCTCGA ACTCCTCGGT CGCGAACATC
CTCGTGGTCG TGGGCACGGC GTACGACCTC ACGGGCGACG TCACGTACCA GCGGGCGGCG
CTCGAGGGGC TGGACTACCT GTTCGGCCGC AACGCGCTCA ACCAGTCGTA CGTGACCGAC
TGGGGCACGA CGACGTCGCA GAACCAGCAC TCGCGCTGGT TCGCCCACCA GCTCGACCCG
GCGCTGCCGA ACCCGCCGAA GGGCTCGCTC GCCGGCGGTC CGAACTCGCA GGTCAGCACG
TGGGACCCGA CGATGCAGTC CACGCTCTCC GCGGACTGCC CGCCGGCCAC CTGCTACCTC
GACGAGATCA GCTCGTGGGC GTCGAACGAG ATCACCGTGA ACTGGAACTC GGCGCTGTCG
TGGGTCGCGT CGTTCGCGGC CGACCAGACC GGTGCCCAGC AGGAGACCCC GGTTGCGCCC
GTCGTCACCA GCCAGCCCTC CGACCAGTCG GTCGGTGTCG GGGCGACGGC GAGCTTCACC
GCGGCCGCGT CGGGCGTCCC GGCGCCGACG GTGCAGTGGC AGGTGCGTCA GGGCAAGAAG
TGGCGTGACG TGCCGGGTGC GACCTCGACC ACGCTCACCG TCGTGGCCTC GACGCCGAAG
GCGGGCGGCG AGTACCGCGC GGTGTTCACG AACGCGTCGG GGACGGCGAC CAGCGACGTC
GCGCGGCTCA CCGTCAAGCA CCAGGCGCCG GTCGTGATCA AGCACCCGGT CGACACGGTC
GGGAAGGTCG GACAGCAGGT GACGTTCACC GCGGCCGCCT CCGGCCACCC GCAGCCGACG
GTCCGCTGGC AGCAGCGTCG TGGTGAGGGG ACGTGGACCG ACGTGAAGGG GGCGAAGAAG
GAGGAGCTCC GCGTCCTCGT CACGCCGAAG TCGCAGGGTC TGCAGTACCG GGCCGTGTTC
ACCAACCCCG GTGGCACGGT GACGACCGAC GCGGCACGCC TGACGGTCCG CGGCGGCAGC
TGA
|
|---|
| Protein sequence | MVSRRTRRGL RAATAITSAG VLAAIGLLPA VAAVDDAFDD GPGAWIAYGT DGDIDTSSGA
LCVDVPAGSA QYGVGVVLNG VAVEEGATYT FAYTASASTD VTIRALVGQN GAPYGTVLDT
TPALTAEPTA VEETFTASAS YPATATDESP EGQIAFQLGG FSDDAWTFCL DDVSLSSESE
LLPHTSFAEG LGPWGLYGTG DPVFADGEMC VEVPGGYSNP WDAGLSFTGL PIEEGENYVL
TLTGRTEPAT PVRVIVGEGG GTYRMVLEQS SAPLGTEATT LTYPFTANTS FPADGDAPGQ
VAIHLGKTAG YTFCLSEVSL STSATPPPPY EPDTGPRVRV NQVGYLPFGP KRATLVTDAT
EAVAWQLLGA DGDEVADGES QPVGADASSG ENVHVIDFSD VTATGEGLTL VADGETSHPF
AIDADLYAQL RYDALNYFYL ARSGIDIEAS IVGEEYAREA GHVGVAPNQG DTEVPCIGPR
DYYDGWTCDY TLDVTGGWYD AGDHGKYVVN GGISVAQLLA TYERTLHVEG ASTEALADGT
LNLPEHGNGV PDVLDEARWE LEWMLKMVAP SGEYAGMVHH KIHDEGWTGL PLMPADDPQA
RSLHRPSTAA TLNLAAVAAQ GARLFSEYDQ EFADTLLAVA RSTYEAALAH PDVYAPGAAG
SDGGGPYDDS DVSDEFYWAA AELYVTTGEA RYATDLTANP HHTGDVFPAG GFYWGGVAAL
GRLTLATVPN DLPDRDEVQA SVVAAAGRYV AAQQEHPWGS VYSPDGGVYA WGSNSSVANI
LVVVGTAYDL TGDVTYQRAA LEGLDYLFGR NALNQSYVTD WGTTTSQNQH SRWFAHQLDP
ALPNPPKGSL AGGPNSQVST WDPTMQSTLS ADCPPATCYL DEISSWASNE ITVNWNSALS
WVASFAADQT GAQQETPVAP VVTSQPSDQS VGVGATASFT AAASGVPAPT VQWQVRQGKK
WRDVPGATST TLTVVASTPK AGGEYRAVFT NASGTATSDV ARLTVKHQAP VVIKHPVDTV
GKVGQQVTFT AAASGHPQPT VRWQQRRGEG TWTDVKGAKK EELRVLVTPK SQGLQYRAVF
TNPGGTVTTD AARLTVRGGS
|
|---|
| |