Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_0571 |
Symbol | |
ID | 9144440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | + |
Start bp | 609673 |
End bp | 612396 |
Gene Length | 2724 bp |
Protein Length | 907 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | DNA topoisomerase I |
Protein accession | YP_003635682 |
Protein GI | 296128432 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.600151 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00349746 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCGCAG GTCGCAAGCT CGTCATCGTG GAGTCCCCGG CGAAGGCACG CACCATCGCC GGGTACCTCG GTGACGGGTT CGACGTGGAG GCGTCGGTCG GGCACATCCG TGACCTGCCG CAGCCCTCGG AGCTGCCCGC GGACATGAAG AAGGGCCCGT ACGGCAAGTT CGCCGTGGAC GTCGAGAACG GGTTCACGCC GTACTACGTG GTCGACGCGG ACAAGAAGAA GAAGGTCGCC GAGCTCAAGA AGCTCCTCAA GGAGTCGGAC GAGCTGTACC TCGCCACCGA CGAGGACCGC GAGGGCGAGG CCATCGCGTG GCACCTGCTG GCCGAGCTGA AGCCGAAGAT CCCCGTCAAG CGCATGGTGT TCCACGAGAT CACTCGCGAG GCGATCACGC GGGCGCTGGA GAACACGCGC GAGCTCGACG AGCGCCTCGT CGACGCGCAG GAGACCCGGC GCATCCTCGA CCGGCTGTAC GGCTACGAGG TCAGCCCCGT GCTGTGGCGC AAGGTCCGCC AGGGCCTGTC CGCGGGCCGG GTGCAGTCCG TCGCGACGCG GCTCGTGGTC GAGCGCGAGC GGGAGCGCAT GGCGTTCGTC GCGGCCGACT ACTGGGACGT CACGGGCACC TTCGCCGTCG CGGACGACTC GGAGCCGACG TTCTCCGCGC GCCTGACGGG CGTCGGTGGG GCGCGCGTCG CGTCGGGCCG TGACTTCGAC GACCGCGGGG CGCTGAAGAC CCGCGACACC GTGGTCCTCG ACGAGACGCG CGCGCACGCG CTGGTCGCCG GGCTCGACGG CGCCGCGTTC ACGGTGCAGT CGCTGGAGAC CAAGCCGTAC ACGCGCCGCC CCGCCGCGCC GTTCACGACG TCGACGCTGC AGCAGGAGGC GTCGCGCAAG CTGCGCATGA GCTCGCGGCA GGCGATGCGC ACCGCGCAGA CGCTGTACGA GAACGGCTAC ATCACCTACA TGCGCACCGA CTCGCCCGCG CTGTCGACGC AGGCGGTCGA CGCCGCGCGC CGCCAGGTCG CCGAGCTGTA CGGCGCGGAC CACGTGCCCG ACAAGCCGCG CGTCTACACG TCGAAGGCGA AGGGCGCGCA GGAGGCGCAC GAGGCGATCC GGCCCGCGGG TGACCACTTC CGCACACCGG CGCAGGTGGC GCGCGAGCTG TCCGGCGACC AGTTCAAGCT CTACGAGCTC ATCTGGAAGC GCACGGTCGC CTCGCAGATG GCCGACGCGC GCGGGCAGAC GGCGTCCGTG AGGCTGGCGG CGACCGCGCG GACCGCCGAC GGGCCGGTCG AGACCGTGTT CTCCGCGTCC GGCACGGTCA TCACGTTCCG CGGGTTCCTC GCCGCGTACG AGGAGGGCCG CGACCGTGGT CGCTACGACG AGGCGGAGGG CGGGGCGTCC GGCAGCGACG ACGCGCGCCT GCCGCAGATG GCGCAGGGCG ACCCGGTCAC GGGCAGCGAC CTGACGGCCG ACGGGCACCG CACGTCCCCG CCGCCGCGCT ACACCGAGGC GTCGCTCGTC AAGGCGCTCG AGGAGCGCGG CATCGGCCGC CCGTCCACGT ACGCCGCGAC GATCGGCGTC ATCCAGGACC GCGGGTACGT CACCAACCGT GGCCAGGCGC TCGTGCCGAC GTGGCTCGCG TTCGCCGTCA CGCGGCTGCT CGAGGAGAAC TTCGACCGCC TCGTCGACTA CAACTTCACG GCCGGCATGG AGGAGAGCCT CGACGCGATC GCCGCGGGTC AGAAGGGGCG CGTCGACTGG CTGACGGAGT TCTACTTCGG CGACCGCTCG GACTCCGTGG CCAGCGGCGG TCTGCGCGGG CTCGTCGACA ACCTCGGTGA GATCGACGCG CGCGAGGTCA ACTCCATCGA GATCGGCGAC GGCATCACGC TGCGCGTCGG CCGGTACGGC CCGTACCTCG AGGCGCCCGG GGAGGGTCCC GACGACGAGC CGCGCCGCTC GTCCGTCCCC GACGACCTCG CGCCGGACGA GCTGACGGTC GCCAAGGCGC GCGAGCTGCT CGAGACCATG CCCGACGGCG ACAAGGTGCT CGGCACGGAC CCGGGGTCGG GCCACCAGAT CGTCGCGCGC AACGGCCGCT ACGGCCCGTA CGTCACCGAG GTGCTGCCGG AGCCGGAGCT CGACCCGGGC CTGTCCGCCG CCGCCCGCAA GAAGGCGCTG GCCGCGGCGC CCAAGCCGCG CACCGGCTCG TTGTTCAAGT CGATGTCGCT GGCCACGGTC ACGCTCGACG ACGCGCTGCG TCTGCTGTCG CTGCCGCGCG TGGTGGGCGC CGACCCGGAG ACGGGCGCCG AGATCACCGC GCAGAACGGC CGGTACGGGC CGTACCTGAA GAAGGGGACG GACTCGCGCA CGCTCGCGTC GGAGGAGCAG CTGCTCACGA TCACGCTCGA GGAGGCGCTG GCGATCTACG CGCAGCCCAA GCGCGGCCGC GGGCAGACCG CCGCCGCCCC GTTGCGCGAG CTCGGCACCG ACCCGACGAG CGGCAGGCCG ATCGTCGTCA AGGACGGCCG CTTCGGCGCG TACGTCACCG ACGGCGAGAC CAACCGCACG CTGCCGCGGG ACGTGACGCC CGAGTCGATC ACCCCCGAGC AGGCCGTCGA GCTCCTCGCG GAGAAGCGCG CCGCCGGCCC GGCCAAGAAG AAGACGACGA CGCGCAAGAC GACGACACGT CAGAAGTCCG CGGCCAAGAG CTGA
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Protein sequence | MSAGRKLVIV ESPAKARTIA GYLGDGFDVE ASVGHIRDLP QPSELPADMK KGPYGKFAVD VENGFTPYYV VDADKKKKVA ELKKLLKESD ELYLATDEDR EGEAIAWHLL AELKPKIPVK RMVFHEITRE AITRALENTR ELDERLVDAQ ETRRILDRLY GYEVSPVLWR KVRQGLSAGR VQSVATRLVV ERERERMAFV AADYWDVTGT FAVADDSEPT FSARLTGVGG ARVASGRDFD DRGALKTRDT VVLDETRAHA LVAGLDGAAF TVQSLETKPY TRRPAAPFTT STLQQEASRK LRMSSRQAMR TAQTLYENGY ITYMRTDSPA LSTQAVDAAR RQVAELYGAD HVPDKPRVYT SKAKGAQEAH EAIRPAGDHF RTPAQVAREL SGDQFKLYEL IWKRTVASQM ADARGQTASV RLAATARTAD GPVETVFSAS GTVITFRGFL AAYEEGRDRG RYDEAEGGAS GSDDARLPQM AQGDPVTGSD LTADGHRTSP PPRYTEASLV KALEERGIGR PSTYAATIGV IQDRGYVTNR GQALVPTWLA FAVTRLLEEN FDRLVDYNFT AGMEESLDAI AAGQKGRVDW LTEFYFGDRS DSVASGGLRG LVDNLGEIDA REVNSIEIGD GITLRVGRYG PYLEAPGEGP DDEPRRSSVP DDLAPDELTV AKARELLETM PDGDKVLGTD PGSGHQIVAR NGRYGPYVTE VLPEPELDPG LSAAARKKAL AAAPKPRTGS LFKSMSLATV TLDDALRLLS LPRVVGADPE TGAEITAQNG RYGPYLKKGT DSRTLASEEQ LLTITLEEAL AIYAQPKRGR GQTAAAPLRE LGTDPTSGRP IVVKDGRFGA YVTDGETNRT LPRDVTPESI TPEQAVELLA EKRAAGPAKK KTTTRKTTTR QKSAAKS
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