| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_0053 |
|---|
| Symbol | |
|---|
| ID | 9143918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | + |
|---|
| Start bp | 67515 |
|---|
| End bp | 69161 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003635172 |
|---|
| Protein GI | 296127922 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00894848 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCGA CCCTCCAGGC CCGGTCCGTG GCCGCGGCGT TCGGTGACCG CGAGCTGTTC
TCCGGCCTCG ACCTCGTCGT CGCGCCCGGC GACGTCGTCG GGCTCGTCGG CCCCAACGGC
GCCGGCAAGA CGACGTTGCT GCGCATCCTT GCAGGTCAGC GGGCTCCGGA GGCGGGGGTG
GTGGCGCTGT CACCGCCGAC GGCGCAGGTC GGCTACCTGG TGCAGGAGGT CGAGCGCCGG
GCGGACGAGT CGGTGCGGAC GTTCCTCGAG CGACGGACGG GCGTGGCCGA CGCGCAGGCC
GCGATGGACG CGGCGTCCGA CGCGCTCGCG GCCGACGCGC CGGGGGCGGG CGACGCGTTC
ACGCACGCGC TCGAGCGGTG GATGGCCCTG GGTGGCGCGG ACCTCGACGC GCGGCTCGGC
GGCGTCGCCG ACGACCTCGG GCTCGCCGTC GACCTCGACC TGCCCATGAC GGCGCTGTCC
GGCGGGCAGG CCGCGCGCGT CGGGCTCGCG GCGCTGCTGC TCTCGCGCTT CGACCTGTAC
CTGCTCGACG AGCCGACCAA CGACCTCGAC GCCGACGGGC TCGACCGCCT GGAGGAGTTC
GTCGCGCAGG CGTCGGCGCC GGTCGTGGTC GTCAGCCACG ACCGGGAGTT CCTGGCGCGG
ACCGTCACCA CGGTCGTCGA GATCGACCGC AGCCTGCAGC GTGTCGCCAC CTACGGCGGC
TCCTACGACG CGTACCTCGA GGAGCGCTCG ACGGCCCGCC GGCAGGCGCG CGAGGCGTAC
GAGGACTACG CGGGCCGCCG GGACGCGCTC GCGGCCCGCG CCCGCATGCA GCGCGCGTGG
ATGGAGAAGG GCGTGCGCAA CGCGATGCGC AAGGCCACGG ACGGCGACAA GAACGTCAAG
CAGGGCCGCC GCGAGTCGTC CGAGAAGCAG GCGTCGAAGG CGCGGCAGAC CGACCGCATG
ATCGAGCGGC TCGTGGTCGT CGAGGAGCCG CGCAAGGAGT GGCAGCTGCG CATGAGCATC
GCCACCGCAC CGCGCTCGGG GTCCGTGGTC GCGACCGCGC GGGCCGCCGT CGTCCGCCGC
GGGGACTTCG TCCTCGGCCC GGTGGACCTG CAGCTCGACT GGCAGGACCG CATCGCCGTC
ACCGGGCCCA ACGGCTCGGG CAAGTCGACG CTGCTCGCCC TGCTGCTGGG GCGCCTGGCG
GCCGACGAGG GCACCGCGGC CCTCGGGTCG GGCGTGCTCG TGGGGGAGGT CGACCAGGCA
CGGGCAGCGT TCGAGCGCGA CGAGCCGCTG GGCGACGCGT TCGCGCGCGA GGTCCCGGAG
TGGACGACGG CCGACGTGCG CACGCTGCTG GCGAAGTTCG GCCTCGCCGG CCACCAGGTG
GGCCGCCCGG CGGCGTCGCT GTCCCCGGGG GAGCGCACGC GGGCGGCCCT CGCGCTGCTG
CAGGCCCGCG GCGTCAACCT GCTGGTCCTC GACGAGCCGA CCAACCACCT CGACCTGCCG
GCGATCGAGC AGCTCGAGCA GGCGATGGAG TCCTTCGACG GCACGATCCT GCTGGTCACG
CACGATCGCC GGATGCTCGA CACCGTGCGG CTGACGCGCC GCTGGCACGT CGAGGACGGG
CAGGTCACGG AGGTCCGGCC GGACTGA
|
|---|
| Protein sequence | MSATLQARSV AAAFGDRELF SGLDLVVAPG DVVGLVGPNG AGKTTLLRIL AGQRAPEAGV
VALSPPTAQV GYLVQEVERR ADESVRTFLE RRTGVADAQA AMDAASDALA ADAPGAGDAF
THALERWMAL GGADLDARLG GVADDLGLAV DLDLPMTALS GGQAARVGLA ALLLSRFDLY
LLDEPTNDLD ADGLDRLEEF VAQASAPVVV VSHDREFLAR TVTTVVEIDR SLQRVATYGG
SYDAYLEERS TARRQAREAY EDYAGRRDAL AARARMQRAW MEKGVRNAMR KATDGDKNVK
QGRRESSEKQ ASKARQTDRM IERLVVVEEP RKEWQLRMSI ATAPRSGSVV ATARAAVVRR
GDFVLGPVDL QLDWQDRIAV TGPNGSGKST LLALLLGRLA ADEGTAALGS GVLVGEVDQA
RAAFERDEPL GDAFAREVPE WTTADVRTLL AKFGLAGHQV GRPAASLSPG ERTRAALALL
QARGVNLLVL DEPTNHLDLP AIEQLEQAME SFDGTILLVT HDRRMLDTVR LTRRWHVEDG
QVTEVRPD
|
|---|
| |