Gene Ccur_12790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_12790 
Symbol 
ID8375484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp1446576 
End bp1447931 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content51% 
IMG OID644994196 
Productcitrate synthase 
Protein accessionYP_003151640 
Protein GI256827681 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0027871 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones166 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGT GCGACAAACT AGCACTCTAT CAGGACTTCG AGCGCATCAA CTCAATCGAT 
CCTGCATGGT ACGATGCATA CGATGTCAAA CGTGGTTTGC GTAATGCCGA TGGATCAGGC
GTCGTAGCGG GTATTACAAA CATCTCAAAC GTGCATGGTT ACGTGATGAG CGATGGCGAT
AAGGTACCTG ATGAAGGGCG TCTTACGCTG CGCGGCTATA ACCTTGGCGA CCTGATTGGC
GAAGAGGACG CCACGCGGCG TTTCAATTAC GAAGAGATTG CCTATCTGCT TCTTATGGGT
GATTTGCCTC ATCAAGAAGA GCTCGAAAGT TTCGTGGAAG CTCTTGATGC CGAGCGCGAT
TTACCCGATG GTTTCACGGC GTCCATCATC ATGAAGGAAA CGCCACCCGA CATCATGAAT
ATGCTGCAGC GTTGTGTGTT GCTGCTGTAT TCATACGACG TCAGCGCAGA GGTGCGCAGC
TACGAGCATG AGGTGAAAAC AGCCATATCG CTTCTTTCGC GTCTACCGCG GATTGCTGTT
CTGACGTACT ACGCCAAGCA AGCACGTTTT GCAAAAGGTT CAATGATTAT GCATCCGTTT
CTGCCTGGCT CTTCGACGGC TGAAACGATT CTGTCTATGT TGCGTCCCGA TCGCCAATTT
ACCCCAGAAG AGGCGCGCCT GCTCGATATC ATGCTGTGCT TGCATGCTGA ACATGGTGGC
GGAAACAATT CAACCTTTAC CTGTCGCGTT CTTTCTTCGG CTGATACCGA TCCATATGCA
GCATACGCGG CCGCTATTGG ATCGCTCAAG GGGCTCAAAC ATGGGGGCGC GAACCATAAG
GTTCGCGAAA TGCAGCAGGA GATTAAAGAT CACGTTACGT GTTGGGAAAA CGACGATGAA
GTCGCGGATT ATTTGGCGCG TATCGTGAAC AAAAAGGCTT ATGACAACAC GGGTCTCATC
TATGGGATGG GCCATGCGGT TTATACGCGC AGCGATCCGC GCGCTGTCAT TCTCAAGCGA
TTTGCCGCTC GGTTGGCGGC CGGAACTGAA TTTGAAGCGG AGTTTAAGCT GCTCGAATCT
ATTGAGCGGT TGAGTCCCGA GGTCATCCTG CGTGAACGCG GCATCAAAAA AGACATGTGT
GCAAACGTGG ATATGTATTC TGGTTTTGTG TATTCCCTGT TGGGTATTCC TGAAGACTTA
TACACGCCAC TGTTTGCGTG TGCTCGTCTG GCGGGATGGA GTGCTCATCG TTTTGAAGAG
TTGGTAAGCG GTAAACGGAT TATTCGCCCG GCATATAAAT CGACACGTCG CGAGACGCGT
CCGTGGGTTC CCGTGGAAAA GCGGTTGACT GAATAG
 
Protein sequence
MSVCDKLALY QDFERINSID PAWYDAYDVK RGLRNADGSG VVAGITNISN VHGYVMSDGD 
KVPDEGRLTL RGYNLGDLIG EEDATRRFNY EEIAYLLLMG DLPHQEELES FVEALDAERD
LPDGFTASII MKETPPDIMN MLQRCVLLLY SYDVSAEVRS YEHEVKTAIS LLSRLPRIAV
LTYYAKQARF AKGSMIMHPF LPGSSTAETI LSMLRPDRQF TPEEARLLDI MLCLHAEHGG
GNNSTFTCRV LSSADTDPYA AYAAAIGSLK GLKHGGANHK VREMQQEIKD HVTCWENDDE
VADYLARIVN KKAYDNTGLI YGMGHAVYTR SDPRAVILKR FAARLAAGTE FEAEFKLLES
IERLSPEVIL RERGIKKDMC ANVDMYSGFV YSLLGIPEDL YTPLFACARL AGWSAHRFEE
LVSGKRIIRP AYKSTRRETR PWVPVEKRLT E