Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccur_08860 |
Symbol | |
ID | 8375094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptobacterium curtum DSM 15641 |
Kingdom | Bacteria |
Replicon accession | NC_013170 |
Strand | - |
Start bp | 1016376 |
End bp | 1018034 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644993808 |
Product | dihydroxyacid dehydratase |
Protein accession | YP_003151269 |
Protein GI | 256827310 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.131951 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 102 |
Fosmid unclonability p-value | 0.204216 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGAAGCG ATGCGATTAA GAAGGGTCTC GCACGCGCCC CGCACCGCAG CCTGTTAAAG GCCGACGGCT TTACCGACGA AGAACTCGCT CGTCCGCTTA TTGCGGTGGT ATCTTCGCGC AACGAAATTA TTCCTGGGCA TTTGCATCTG CAAACGATTG CTGATGCTGT TTCAGCTGGT ATTCGCATGG CAGGTGGAAC ACCAGCTCAA GTCAATACGA TTGGCATTTG CGATGGCATC GCGATGAACC ATGAAGGCAT GCGCTATTCG CTTGCGAGTC GTGAAGTGAT AGCTGATTCA GTTGAATGTG TGGTGCAGGG GCATCGCTTC GACGGCATGG TGCTGATACC AAGCTGCGAT AAGGTGGTTC CTGGTATGTT GATAGCTGCT TGTCGCCTTA ATATTCCCAC CGTCGTGGTC ACCGGAGGCC CTATGTTGGC TGGTCGTGAT CAGGATGGCA GCGAGACTGA TCTCAACACG TTGTTTGACG CAGTTGGTGC TGTGACGGCC GGCACGATGA GTGAAGATAA GTGTAAGTGG TATGAGGATA GCGCTTGTCC CACCTGCGGA AGCTGCTCGG GCATGTTTAC AGCTAACTCT ATCGGTTGTT TGTGCGAGGC ATTGGGTATC GCACTACCAG GTAATGGCAC GATTCCTGCG GTATATAGCG AGCGGGTTCG CTTAGCCAAG CACGCCGGCA TGAAAGTTAT GGATCTTGTT GCCAACAATA TATGCGCACT CGACATTATC AATGAACATG CGCTGCATAA TGGTATGGCG CTTGACATGG CTTTTGGCGG TTCAACAAAT ACGATGCTGC ACTTAACGGC TATCTCCCAT GCAGCCGGTT GCCCCGTTTC GATGGATGAC TGGGATGCCA TTTGTCAGCA CACGCCGAAT ATCACGCGCA TTGCACCAGC TGGTCCGCTG CACATCGAAG ACCTTAATGC GCAGGGTGGC GTGGCGGCCG TCATCGGTGA GCTGGGGCGC GCTGGCTTGC TTGATGAGGC AGCACTGACC TGCCATGGTA CGATGCGCGA ATGGATAGAC GCCTGTCCGA CGCCTGATGG CGAGGTTGTT CACACTATTG AAAACGCCTA TAGCGCGCAG GGTGGTTTGC GCGTGCTGCG GGGCAATCTT GCTCCTCATG CCTGTGTGGT TAAGCAAAGT GCTGTTTCTG CTGCCATGCG ACAGCATGCT GGTCCTGCGC AGGTATTTGA CAGTGAAGAA GCAGCCTGTG AAGCGATATT TGCCGGCAAA ATCGTTCCCG GTGCTGTTGT AGTTATTCGT TATGAAGGGC CATCAGGTGG TCCTGGTATG CGCGAAATGT TAACGCCGAC CAGTGCGATT TTCGGTATGG GGCTGGCTGA TTCAGTTGCG CTTATTACCG ATGGGCGTTT TTCCGGCGCT ACAAAGGGAC CGTGCATTGG CCATGTGAGT CCTGAAGCGG CAGCGGGGGG TCCGATTGCC TTTGTGCATG ACGGCGATGT TATTCGGATC GATCTTGATG CCGGCACAAT TGAGCTCGAT GTGCCTGCCG ATGAACTGGC GCGTCGTCGG GCTGCTTGGC AGGCTCCCAA ACCGAAATAC ACCACGGGAG TTCTTGCCCG TTATGCCAAG TTGGTTTCGA GTGCTGATAA GGGGGCGTAT TTCGGATGA
|
Protein sequence | MRSDAIKKGL ARAPHRSLLK ADGFTDEELA RPLIAVVSSR NEIIPGHLHL QTIADAVSAG IRMAGGTPAQ VNTIGICDGI AMNHEGMRYS LASREVIADS VECVVQGHRF DGMVLIPSCD KVVPGMLIAA CRLNIPTVVV TGGPMLAGRD QDGSETDLNT LFDAVGAVTA GTMSEDKCKW YEDSACPTCG SCSGMFTANS IGCLCEALGI ALPGNGTIPA VYSERVRLAK HAGMKVMDLV ANNICALDII NEHALHNGMA LDMAFGGSTN TMLHLTAISH AAGCPVSMDD WDAICQHTPN ITRIAPAGPL HIEDLNAQGG VAAVIGELGR AGLLDEAALT CHGTMREWID ACPTPDGEVV HTIENAYSAQ GGLRVLRGNL APHACVVKQS AVSAAMRQHA GPAQVFDSEE AACEAIFAGK IVPGAVVVIR YEGPSGGPGM REMLTPTSAI FGMGLADSVA LITDGRFSGA TKGPCIGHVS PEAAAGGPIA FVHDGDVIRI DLDAGTIELD VPADELARRR AAWQAPKPKY TTGVLARYAK LVSSADKGAY FG
|
| |