Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccur_06700 |
Symbol | |
ID | 8374878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptobacterium curtum DSM 15641 |
Kingdom | Bacteria |
Replicon accession | NC_013170 |
Strand | + |
Start bp | 781206 |
End bp | 783200 |
Gene Length | 1995 bp |
Protein Length | 664 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644993593 |
Product | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
Protein accession | YP_003151062 |
Protein GI | 256827103 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00896986 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 105 |
Fosmid unclonability p-value | 0.656809 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAGCAC AGGCCGGGCG TATGCGTTTG CGTCGCCTGC GTAGCATGAC GTTTGGTGCA AAGCTCAGTC TTATTGTGCT TTTGGTCATT GCTCTTGCTG CTGTGTTTGC CGCGCAGATT GCGCCACATA ATCCTCTTGA GATCTTTACT GCTCGTCAGG CTCCGAGTGC CGATTTTCTA TTTGGTACCG ACGATAAGGG TCGTGATGTA CTGTCGCGCA TGATCTTTGG CGCACGTTAT TCGCTGGTAA TTGGTTTATG CTCTACAGCA CTAGCACTTG TAATCGGTTC GATTTTTGGC GCGTTGGCAG CTGTTTCAAG CAAAGTTGTC AACGAGATTA TCATGCGCAT TATGGACATC ATTATGTCCT TCCCGGGTAT TGCCTTGGCG GCAGTGTTTG TAACCGTGTT TGGCAATTCG GTATTTTCGC TTATTGTGGC GATTGCCTTT TTGTATATCC CACAGATTGC CCGCGTTGTT GCCGCCAATG TGACCAGTGA ATATGGGAAA GACTATGTTC GTGCGGTGGT AGTGGCTGGG GCACGCGCTC CTTGGATTTT ATCTAAGCAC GTTGTGCGCA ATTGTTTGGC ACCGGTTGTC GTGTTTACCA TTTTGCAGGT AGCTGATGCT ATCGTTTTTG AGGCCAGTCT TTCATTCATT AGTGCTGGCA TTCCTGAGCC TACTCCCACC TGGGGTAATA TTCTTGCTGA TGCACGCAGC GGCGTACTTG CTGGTCGGTG GTGGCAGGCG CTGTTCCCTG GCTTAGCTAT TATGATTACG GTACTGTGTC TCAACATTCT CTCTGAAGGC ATTACCGACG CTATGGCGGC ACCAAAATCC GCTGTCAATA TAGATGCTGA CGACCTGGTT GGGTCGCGTG AAGCCGATAA GATGGTGGCC GACCCGAAGC TTGCTTACGC TGCCCAGGCC ACATCTCTTT CAGCGCGACT TGCAGAACTG AAAGAGGTTG AACAGCATCG TACCGACCGG TTTATGGCAC ATACTGAAGT TGATCCGATA CTGGTGGTTG AAGATCTTTC GATTGCTTTC CCACGGCATG GCGATGTTGA TGTGATCGAT CATGTGAGCT TTGTCGTGCG GCCGCGTCAA ACCATGGGTT TGGTTGGGGA ATCAGGCTGC GGTAAGTCCA TTACGTCACT GGCGGTTATG GGCCTGCTTG ATCCGCGTGC CCGCATTACA TCAGGGCGAA TACTCTATCA GGGCCAAGAC CTTCTGAAGA TGTCCGCTGC TGAAATGAAT GACTTGCGCG GTCGCGAGAT TGCGATGGTC TATCAAGATG CGCTGTCGTC TTTGAATCCG TCGATGCTTA TTCGCAAACA GATGCGGCAG CTAACTCGCC GTGGTGGTAC GCGTTCGGCT GAAGAATTAC TGACGCTCGT GGGGCTTGAT CCAAAGCGTA CGCTTGATTC GTATCCGCAT GAGCTGTCTG GCGGACAGCG CCAGCGTGTG CTGATCGCTA TGGCACTAAC GCGCGATCCA AAATTGATTA TCTGTGACGA GCCCACAACA GCGCTTGATG TAACAGTGCA AAAGCAGGTT ATTGATCTGC TGAATAAGCT GCAGAAAGAA CTGGGCTTTG CGATGGTGTT TGTAAGCCAC GATCTGGCGC TTGTTGCTGA AGTGGCAAAT TCGATTACTG TCATGTATGC CGGTCAGGTT GTTGAACAGG GCCCTGTCAA CGATATTCTG ACAAGTCCTA TTCACGAGTA CACGCGTGGC CTGTTGGGTT CGGTGCTTTC CATTGAAGCA GGGGGAGGAC GCCTTCACCA GGTGCCTGGA TCGGTGCCGA GTCCACGTGA TTTCGCAGCA GGTGATCGTT TTGCTCCGCG GTCAAGCCAT TCGGATGTTT CTTCATCGGT ACGTCCGGTT ATCAAGCGTT GGGGGCAAAC CGACCACTAT TATGCTGAAC TTCCCGATGA AGAACTTGCG CGCGTTGGGC TTGAACCCGT GGCGCAGAAG GGAGGTGTCG CATGA
|
Protein sequence | MEAQAGRMRL RRLRSMTFGA KLSLIVLLVI ALAAVFAAQI APHNPLEIFT ARQAPSADFL FGTDDKGRDV LSRMIFGARY SLVIGLCSTA LALVIGSIFG ALAAVSSKVV NEIIMRIMDI IMSFPGIALA AVFVTVFGNS VFSLIVAIAF LYIPQIARVV AANVTSEYGK DYVRAVVVAG ARAPWILSKH VVRNCLAPVV VFTILQVADA IVFEASLSFI SAGIPEPTPT WGNILADARS GVLAGRWWQA LFPGLAIMIT VLCLNILSEG ITDAMAAPKS AVNIDADDLV GSREADKMVA DPKLAYAAQA TSLSARLAEL KEVEQHRTDR FMAHTEVDPI LVVEDLSIAF PRHGDVDVID HVSFVVRPRQ TMGLVGESGC GKSITSLAVM GLLDPRARIT SGRILYQGQD LLKMSAAEMN DLRGREIAMV YQDALSSLNP SMLIRKQMRQ LTRRGGTRSA EELLTLVGLD PKRTLDSYPH ELSGGQRQRV LIAMALTRDP KLIICDEPTT ALDVTVQKQV IDLLNKLQKE LGFAMVFVSH DLALVAEVAN SITVMYAGQV VEQGPVNDIL TSPIHEYTRG LLGSVLSIEA GGGRLHQVPG SVPSPRDFAA GDRFAPRSSH SDVSSSVRPV IKRWGQTDHY YAELPDEELA RVGLEPVAQK GGVA
|
| |