Gene Ccur_05280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_05280 
Symbol 
ID8374736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp623935 
End bp625218 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content49% 
IMG OID644993452 
ProductNa+/H+ antiporter NhaD-like permease 
Protein accessionYP_003150931 
Protein GI256826972 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1055] Na+/H+ antiporter NhaD and related arsenite permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00452753 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones133 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACTC AACCGCAAAT CATAGCCATC GTCGTATTTG TCGGCGTTAT GACGCTTGTC 
GCCACCGAAA AGGTGCACCG TTGTTTGGCA GCTCTTGCCG GCGCGCTCAT TCTTGTTGTG
ACGGGTGTTA TTAGTTTCGA TACGGGAATC TCCCATATCG ATTTCAACAC TATCGGTGTT
TTACTGGGCA TGATGCTTTT TGTCTCGGTG ATAAAAGAAT CGGGTCTGTT TGAATATACG
GCACTGAAAG CTGCGCAGAT TGCCAAGGGT GATCCATGGC GTATTATGGT GGCGTTTATA
CTGATAACTG CCATGCTTTC AGCACTGCTC GATAACGTGA CCACCGTGTT GCTGGTCGGT
CCTATGACTC TTGTTGTCTG TCGGATGCTT GAAATTAATC CGATACCGTT TTTCCTTACT
GAAATTATGG CGAGTAACAT TGGTGGTACA GCAACGCTTA TCGGCGATCC GCCTAACATC
ATGATCGGCT CGGCAGCAAA CCTGACTTTT TTCGATTTCG TTGCCAATGA TGCACCGGCG
GTTGTTGTTA TTCTTGCTGT TGTTATTCTG GCATTCCGTT TTATGTATGG GCGCAACATG
GGCGTTGACG AGACGCATCG CGCTGCCATT ATGAAACTCA ATCCTAAAGA GAAGATTCGT
GACTTAAGTC TTTTCCGAAA GAGCCTCGTC ATGATTGCCC TTGTGGTGGT CTTCTTTATG
GTTCATGGAC AGCTTGGTCT TGAATCCAGT GTCATTGCGC TGTCTGCCGC CTGCATCATG
ATGCTTATTG GTCGCGCCGA TTTGGAATTG TCTGTGTTCA ACGTGGAGTG GACAACCATT
GGCTTCTTCT GTGCCCTCTT TATGGTTGTT GGTGCCCTAT CTGAAACCGG TGTTATTACC
ATGCTGGCTG AATGGATTAT GGACATCACA AACGATAATC CGCTTGCCAT GATGATCGTG
ATTCTCTGGG CGAGCGCCAT TATTAGCGCG GTGCTCGACA ACATTCCGTT TGTCGCCACA
ATGATTCCTG TCATCACTGC CATTGGGATG ACCGGTGTGG ATGTCGTTCC CCTGTGGTGG
GCTCTTTCGC TTGGCGCGTG CTTAGGTGGC AACGGTACGC TTATCGGAGC AAGCGCCAAT
GTGGTGTTAT CGTCTATTTC GACGAAGGAA GGGTATCCCA TTTCCTTCAT GGACTTCACG
AAGGTTGGCT TCCCCGTCAT GATACTTACG GTAGCGGTGG CGACGGTTTA CTGTCTTATC
CGCTATGGCT TGCCCATGAT GTAG
 
Protein sequence
MFTQPQIIAI VVFVGVMTLV ATEKVHRCLA ALAGALILVV TGVISFDTGI SHIDFNTIGV 
LLGMMLFVSV IKESGLFEYT ALKAAQIAKG DPWRIMVAFI LITAMLSALL DNVTTVLLVG
PMTLVVCRML EINPIPFFLT EIMASNIGGT ATLIGDPPNI MIGSAANLTF FDFVANDAPA
VVVILAVVIL AFRFMYGRNM GVDETHRAAI MKLNPKEKIR DLSLFRKSLV MIALVVVFFM
VHGQLGLESS VIALSAACIM MLIGRADLEL SVFNVEWTTI GFFCALFMVV GALSETGVIT
MLAEWIMDIT NDNPLAMMIV ILWASAIISA VLDNIPFVAT MIPVITAIGM TGVDVVPLWW
ALSLGACLGG NGTLIGASAN VVLSSISTKE GYPISFMDFT KVGFPVMILT VAVATVYCLI
RYGLPMM