Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccur_02120 |
Symbol | |
ID | 8374420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptobacterium curtum DSM 15641 |
Kingdom | Bacteria |
Replicon accession | NC_013170 |
Strand | + |
Start bp | 258458 |
End bp | 260089 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644993135 |
Product | 23S rRNA (uracil-5-)-methyltransferase RumA |
Protein accession | YP_003150625 |
Protein GI | 256826666 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 125 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGGTA GTGTTCATCC CATTGCGCTC TGTCACAATA GGGATATGAG CAGACAAAAG AAAAAGCGAT CAACCAAGGA TACGCAGCGT GCGAAGCGCA CAACAAAAAT GCGTTCTCGT GACCGAAATC GAGCGGGCAG CCAGAAACGG GCAGGTAACG CGACGCGCTC GGGCGGACAT AATCAAGCGA GCAATCGGAA TCGCGCAAGT GCTCAGATTC AAACAGATGA CCAGATCAAA ACAAGAAATC GAAAGCAGTC GAGCGGACAT GTTCGAGCTG ACGAACAGAA TCGTGCGGAC AATTACGTGT CCCATCCGCG TGTTTGTCCG TTATCGGCTG AGTGTGGCGG ATGCTCGCAT ATCGAAGAAC CTTATGCGCA TCAGCTAAAG CGAAAGCAGT ATTTCATTGC CGAGCTGTTT GCAGACGAGA TCAAAGCGGG CTGCACCCTT GAGCCCATTA TTGGTATGGA AGATCCGTTT GGCTTTCGCA ATAAAATTGC GTCACCCTTT GCGCCGGTGC GATCAAGCCG CACAGGCAAG AGGGTGCGGC ATACCAAATC TGGAGACGCC ACTTTACAGC AGGACACTGC TGCCCGACAG CGAAAGACAA GCGTGAACTC ACTTTCGCGT TCGCGGTCTA CTTCATCTGC GGTGTCTTCA ATGCGCTATG GTTTATATGC GGCGGGCACT CATCGTCTCA TCAGGGCGGA TAAGTGCCCG GTCGAGCACC CTATAGGGCG ACGTGTTGTG GCGGCTACTG CGCAGCTTAT GCGTAAATGG GATATTGCCC CTTACGATGA AGATGCCGGT ACTGGCTTCA TGCGTCATGT TATTGTACGC GTCGGGCATG AGAGTGACGA AGTCCTCGTG ACGCTTGTTA CGAATGGCAA GGTCTTCCCC TCAGGTAAAA ACTTTGCGCG GCATCTTAAG AAACACTGCC CCGAAATAAC CACGGTGGTT CAAAACGTCA ATATGCGCAG CACCAATGCT ATTTTCGGTG GCGAAGAGCA GGTGCTCTAT GGCCCAGGCT TTATCCTCGA CACATTGTGT GGCCTTTCAT TTCGCATATC GTCCCATTCG TTTTATCAGG TCAATGCTGT GCAGACCGAA GTACTCTATC GCACTGCTCT TGAAATGGCA GCTTGCACCA GTAGTCATCA GGCACTGACG ATTTTGGATG CATACTGCGG CACCGGCACC ATTGGTTTGG TGGCAGCTTC ACAGGTGCCA AACTCCCAGG TAATAGGTAT CGACAACGCT TCATCTTCCA TCCGGGATGC CCGGCAAAAT GCCGTGCATA ACGGTATTGC TAATGCAACG TTCCTCTGCG AAGACGCAAC CGACTTTTTG CTTCACCGTG CTGCAGCAAG CGACTCCATT GACGTGCTCA TGATGGATCC GCCCCGTGCT GGATCAACAT CGGAATTTAT TGAAGCAGCA TGTGCGCTTG CGCCCGAACG CGTGGTCTAC ATTTCGTGCA ATCCTGCTAC TCAGAAGCGC GATGTGCGGT TGTTTGCACG CGGGGGTTAT CATCTTGTGC GCCTGCGTGC CGTCGATATG TTCCCGCACA CCGACCACAT TGAAACCGTT GCTCTTTTAA TGCGGAATGC CGAATTCTTC GCGCAATCTT AG
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Protein sequence | MKGSVHPIAL CHNRDMSRQK KKRSTKDTQR AKRTTKMRSR DRNRAGSQKR AGNATRSGGH NQASNRNRAS AQIQTDDQIK TRNRKQSSGH VRADEQNRAD NYVSHPRVCP LSAECGGCSH IEEPYAHQLK RKQYFIAELF ADEIKAGCTL EPIIGMEDPF GFRNKIASPF APVRSSRTGK RVRHTKSGDA TLQQDTAARQ RKTSVNSLSR SRSTSSAVSS MRYGLYAAGT HRLIRADKCP VEHPIGRRVV AATAQLMRKW DIAPYDEDAG TGFMRHVIVR VGHESDEVLV TLVTNGKVFP SGKNFARHLK KHCPEITTVV QNVNMRSTNA IFGGEEQVLY GPGFILDTLC GLSFRISSHS FYQVNAVQTE VLYRTALEMA ACTSSHQALT ILDAYCGTGT IGLVAASQVP NSQVIGIDNA SSSIRDARQN AVHNGIANAT FLCEDATDFL LHRAAASDSI DVLMMDPPRA GSTSEFIEAA CALAPERVVY ISCNPATQKR DVRLFARGGY HLVRLRAVDM FPHTDHIETV ALLMRNAEFF AQS
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