Gene Ccur_00160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_00160 
Symbol 
ID8374224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp20541 
End bp22661 
Gene Length2121 bp 
Protein Length706 aa 
Translation table11 
GC content51% 
IMG OID644992940 
ProductDNA/RNA helicase, superfamily I 
Protein accessionYP_003150431 
Protein GI256826472 
COG category[R] General function prediction only 
COG ID[COG3973] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones108 
Fosmid unclonability p-value0.805287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAGA TATTCGAAGA AGAGCAAGCA CACCTTACGG AAACCTACGG GAAGCTCGAC 
GTCATCAAAC AGGACGCCGA GCAAAAGCTT GCGGCAGTTC AATCCGAAGC TGCGCACAAC
ATGGAATCCA TGCGCAATGA AACGTCCCTT GACTTCAGTG ATGATGAAAA CGCACTCGAA
ACGGTGGCTG CACTCGAGGC GGTTAACAGC GTCATCGATG CGTACAATCG CACCATCCAG
GTAAATAGCG AGCGCTTGAA AAATGCCACG CAGCTGATGG CACAGCCGTA TTTCGCTAAG
GTGAGTCTTC AGTTTCACTC CGACGAGCCC ACTCGCGATA TCTATTTGGG AAGTGTTGGA
ATAACCGACG AAGCGCGACG TCATTTTATT GTTGACTGGC GCAGCCCGGT GGCCGAAACC
TACTACAACC AGGAAAACGG CCCTATGTCG TACACGGCAA ATGGCCGAAC GATATCTGTT
GACTTGAAAT TACGGCGCCA GTTCGACATT ACGCGCAACA CCTTAAACGC CTACTTCGAC
ACCACCGTCG CCATTGAAGA TCCTCTTTTG CTGGCATCGC TTGCTGCAAA CCATTCGGAA
AAGCTTAAGG CCATCACCGC CACCATTCAA AAAGAGCAAA ACGAAGTGGT GCGTCACGAT
GATGTGCCGG TTCTTCTGGT AAACGGCATT GCTGGCAGTG GCAAGACATC AGTGTTGTTG
CAGCGCATTG CGTTTTTGTT TTACCAGAAG CGAGATACGC TGCGTCCCGA CCAAGTGTGT
CTGCTCACGC CGAACCCAGT GTTTGAAAAG TATATCGACA ACGTGCTTCC TGATATGGGC
GAGGCAAACC CACAAATCTT TACGTGGGCA GATTTTGTTG CGCTGCTGGG CCTAAGTGAA
CGCGGCGACG GCAGAGACAC TTCTGCCGAA ACGCTCCATA CACTTGAGCA AAACATGGCG
TCTCTTCACC TTGAAGCGCA CGATTTCTCT GAGATAGCTA TCGACGGAAT GCGCCTGGTA
AAGACAACAC AGATACAAGG CATCGCCGCC AAATATAAGA ATATCCCTGT CGGTCCACGT
CTTATCGCGC TCATGAAAGA AGACCTGCAT GCGCGCCTTG ATACACGGCT GGGACAACTT
GCTTCTGACG AAGACATTCA CGATCGTATG TTGTCTCTTG AAGTAAGCGA GCAGATTCGC
CTGTTTGGGC AGACGCTTGC GCCCCAAAGC GAAAAAGAGA CTATCGAGTA TGCACGTACT
TTTGTTCAGC ATCTGTATGG CACTGCACAT GACAAGATAG AACAGGTTAG TTGGCTGCGC
TTTGATCGTA TCGGGATGCG TATGCTTAAT GCGGGACATC TCTCATCGGT TGCATGGCTT
TTCTTAAAAA CCCTGATCAC AGGAACAGGC GCACACGATA TTCGCTATGT CACTATTGAT
GAGGTGCAGG ATTACACCGA GGCACAGCTT ATGGTTCTGG CTCGCTATTT TAAACGTGCG
CATTTCTTGC TCTTGGGCGA TGAAAATCAG GCCATCAACG AAGGCACTGC GTCGTTTGAT
CGCATTCGTG CGATATTTGC GGCGAGCCAT GGTTCTGTCG ATGAATGTCG TCTTATGACA
AGCTATCGAT CGACAGCGGA AATCACTGCC CTTTTTACTG GACTCATGGA CTCAACCGAA
CGAGTAAAAA CACACTCGGT GCAGCATGGA GGAAAACGAC CGCGTATCGA AGTACTCCCC
GATGAAGAGG CACTTCTGGA AGCACTACGG GGCATACTGC ACACTGAACA AGATTCAGAA
GGATTGTGCG CGATCATTGC GCCCACCCAT CAGGACGTCC AACGGATAGC TCAGAAGCTC
ACTGGCATTA CCGTTATCGA TCATCATGCA GTTCTCCCTG GCCGGGGAGT TGTGCTGCTT
GATTTGCCGC TGGCCAAAGG ACTTGAATTC GATCACGTAG TTATCGTTGA TGCCGATAGG
CACGTTTACC CGGATACGCA GCTTGCACGC CGACGTCTTT ACACTGCTCT TTCACGAGCA
GCTCATCAGG TAACGGTGTT GGCACAAAAG TCTCTTACTC CGTTGCTTGA GTCAGCAACC
AGCGCTTCGC TTGATCTCTA A
 
Protein sequence
MDQIFEEEQA HLTETYGKLD VIKQDAEQKL AAVQSEAAHN MESMRNETSL DFSDDENALE 
TVAALEAVNS VIDAYNRTIQ VNSERLKNAT QLMAQPYFAK VSLQFHSDEP TRDIYLGSVG
ITDEARRHFI VDWRSPVAET YYNQENGPMS YTANGRTISV DLKLRRQFDI TRNTLNAYFD
TTVAIEDPLL LASLAANHSE KLKAITATIQ KEQNEVVRHD DVPVLLVNGI AGSGKTSVLL
QRIAFLFYQK RDTLRPDQVC LLTPNPVFEK YIDNVLPDMG EANPQIFTWA DFVALLGLSE
RGDGRDTSAE TLHTLEQNMA SLHLEAHDFS EIAIDGMRLV KTTQIQGIAA KYKNIPVGPR
LIALMKEDLH ARLDTRLGQL ASDEDIHDRM LSLEVSEQIR LFGQTLAPQS EKETIEYART
FVQHLYGTAH DKIEQVSWLR FDRIGMRMLN AGHLSSVAWL FLKTLITGTG AHDIRYVTID
EVQDYTEAQL MVLARYFKRA HFLLLGDENQ AINEGTASFD RIRAIFAASH GSVDECRLMT
SYRSTAEITA LFTGLMDSTE RVKTHSVQHG GKRPRIEVLP DEEALLEALR GILHTEQDSE
GLCAIIAPTH QDVQRIAQKL TGITVIDHHA VLPGRGVVLL DLPLAKGLEF DHVVIVDADR
HVYPDTQLAR RRLYTALSRA AHQVTVLAQK SLTPLLESAT SASLDL