| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_3096 |
|---|
| Symbol | murC |
|---|
| ID | 7311693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 3632183 |
|---|
| End bp | 3633586 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643610000 |
|---|
| Product | UDP-N-acetylmuramate--L-alanine ligase |
|---|
| Protein accession | YP_002507368 |
|---|
| Protein GI | 220930459 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
|---|
| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
[TIGR01082] UDP-N-acetylmuramate--alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00519614 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAATATTA ATTCTAACAT TTTAGATTGT GAAAAAATTA AGTATGTCCA TTTTGTAGGA
ATAGGCGGCT CAAGCATGAG CGGTCTCGCC GAAATTCTTT TAGCAAAAGG CTATAAGGTA
TCAGGCTCGG ATATCAAATC CTCTAATTCT ACCCAGAAAT TGGAAGCAAA GGGTGCTGAA
ATATTTATTG GTCACCGTTC CGAAAATATT ACCGATCAGG ACCTCACTGT TTATACAGTT
GCCGTTAAGG AGGATAATCC TGAAATAACC CGTTCAAAAG AGCTGGGTCT ACCTGTCATA
GATCGTGCCG AACTATTGGG GCTTCTGATG AAAAAGCATT CCTTTGGAAT AGCCGTTGCA
GGTACTCACG GAAAGACCAC AACAACGTCT ATGATAACTA CAATAATGCT AGAGTCCAAT
ACAGACCCAA CCGCTCATAT AGGAGGCGAG CTAGACTGTA TCGGTGGAAA TACCCGCATC
GGTAATTCAG AATTTTTTAT AACTGAGGCG TGCGAATATT ATGGAAGCTT TTTAAAATTT
CATCCGTTTA TGGCAGTTGT CTTAAATATA GAATTAGATC ATGTGGATTA TTTCCGTGAT
TTGGAGCATA TTAAGTCAAT CTTTGGAGAA TTTCTTGCTC TTGTTCCCAA CGACGGATAT
ATTGTGGCAT GTGCCGATGA TGAAAATACT CTTTCTGTCG TCAGTAAAAA AGAGTGTAAC
ATAATTACCT ACGGATTAAA AAATAAGGAT GCAATGTGGA CTGCTAAAGG TATAACATAC
AACAGTATGG GCTGTGCTTC CTTTGACGTA TACAAAAAGG GAGAAAAAGT GGGAAATGTC
TCCTTGTCCG TTCCAGGCCC GCATAACGTA AATAATTCAC TTGCAGCTAT TGCAGTAGCT
TACACTTGCG GCTGCAGTAT GGAAAACATA GCTTATGGAC TTTCAAGATT CGGAGGAAGC
CATAAGCGAT TTGAATTGAA AGGCTTGGTT GATAACATTA AGGTTATTGA TGACTATGCC
CACCATCCGT CAGAAGTTCA GGCAACTCTC AATGCGGCAA AAAGCAGCAA CCATAATAAA
ATATGGTGTG TTTTTCAACC CCATACCTAT ACACGAACAA AGGCATTTTT GGATAGGTTC
TCAAAATCCT TTGGTGAGGC AGATAACATA ATAATAACTG ATATTTATGC AGCCCGGGAA
AAAGATCCGG GGGATATACA CTCAAGTATG CTGGCAGACA GGATTCGTGA GAATGGTGGT
AATGCCGTAT ATATCAGTGA TTTTCAGGAT ATAGCCGAGT ATCTGGATAA AAAAGTAGAA
CCAGGAGATC TTATTCTAAC AATGGGGGCA GGCGATATTG TAAGAATTGG CGAAATGTTC
TTAAACCTAA GAGCAAATAA GTAA
|
|---|
| Protein sequence | MNINSNILDC EKIKYVHFVG IGGSSMSGLA EILLAKGYKV SGSDIKSSNS TQKLEAKGAE
IFIGHRSENI TDQDLTVYTV AVKEDNPEIT RSKELGLPVI DRAELLGLLM KKHSFGIAVA
GTHGKTTTTS MITTIMLESN TDPTAHIGGE LDCIGGNTRI GNSEFFITEA CEYYGSFLKF
HPFMAVVLNI ELDHVDYFRD LEHIKSIFGE FLALVPNDGY IVACADDENT LSVVSKKECN
IITYGLKNKD AMWTAKGITY NSMGCASFDV YKKGEKVGNV SLSVPGPHNV NNSLAAIAVA
YTCGCSMENI AYGLSRFGGS HKRFELKGLV DNIKVIDDYA HHPSEVQATL NAAKSSNHNK
IWCVFQPHTY TRTKAFLDRF SKSFGEADNI IITDIYAARE KDPGDIHSSM LADRIRENGG
NAVYISDFQD IAEYLDKKVE PGDLILTMGA GDIVRIGEMF LNLRANK
|
|---|
| |