Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2908 |
Symbol | |
ID | 7311524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 3463096 |
End bp | 3464175 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 643609808 |
Product | transcriptional regulator, CdaR |
Protein accession | YP_002507182 |
Protein GI | 220930273 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3835] Sugar diacid utilization regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGTAA AATTATTTCA GACACTGTCT GACAAATATA GTGAAATACT CGGTAAAGAG GTTGGAGTAA CAGATGATGA GGGTGTTATT ATAGCCCATT CAAATTTTCA GATGATAGGA CAACAAGACC AGAAAGCTGC TTCTTTTGTA CCGGAAAAGG CACAACAGTC ACTTATAGAC GGTATATTAT ATAATAAGGT TATCTTGAAG AATAAGATAG AATTTATTAC ATTTATACAG GCGGCTGATC CTCAGGATTC TAAATACCTT GAATTATTTA CTTTAAATAT CCTTAATCTA AAAAGCTATT ATGACGAAAA GTATGATAAA AATACTTTTG TCAAGAACAT TGTAGTCGAA AATATATTGC CCGGCGACAT TCTTGTAAGG TCAAAAGAAC TTCACATAGA CTATAATGCA ATGAGAGTCG TTTATCTGAT AAATGCCACT AGTGACAAGG ATGTTCACGT CCATGAAGTT ATTGAAAGCC TCTTTCCGAA TAAAGGAAAA GATTTTGTGG TTGTAATTGA CGATGATAAT GTTGTTCTCG TAAAAGAGGT TAAGAGCAAG GATGACTACA AGGAAGTATA TAAGCTTGCA AGAGTGATTG TGGATACCAT TAACTCGGAA CTTATGGTAA AGGCATATAT CGGTATAGGA ACTATCATAG ATAACCTTAA AGATATAACA AAATCATTTA AAGAAGCACA GATGTCCATG ATAATCGGAA ATATATTCAG TGAAGACAAT AATATATTTG ATTATAACAA TTTGGGTATG GGACGTTTAA TATATCATAT TCCAACCACC TTATGCCAGC TTTTCCTTGA AGAGGTTTTC AAGGAAAATT CTGTAGATTC TCTGGATAGT GAGACAATGC TGACAATACA AAAATTCTTT GAGAATAATC TGAATGTCAG TGAAACTGCA AGACAGCTCT ATATTCACAG AAATACCCTT GTATACAGAT TGGAAAAAAT CAAGAGACTC ACAGGCCTTG AACTCACCAG CTTTGATGAT GCAGTAATTT TCAAAGTAGC AATACTTGTC AAAAAGTATC TGGCGAACAT CAACGATTAG
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Protein sequence | MSVKLFQTLS DKYSEILGKE VGVTDDEGVI IAHSNFQMIG QQDQKAASFV PEKAQQSLID GILYNKVILK NKIEFITFIQ AADPQDSKYL ELFTLNILNL KSYYDEKYDK NTFVKNIVVE NILPGDILVR SKELHIDYNA MRVVYLINAT SDKDVHVHEV IESLFPNKGK DFVVVIDDDN VVLVKEVKSK DDYKEVYKLA RVIVDTINSE LMVKAYIGIG TIIDNLKDIT KSFKEAQMSM IIGNIFSEDN NIFDYNNLGM GRLIYHIPTT LCQLFLEEVF KENSVDSLDS ETMLTIQKFF ENNLNVSETA RQLYIHRNTL VYRLEKIKRL TGLELTSFDD AVIFKVAILV KKYLANIND
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