| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2709 |
|---|
| Symbol | |
|---|
| ID | 7311343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 3262296 |
|---|
| End bp | 3265406 |
|---|
| Gene Length | 3111 bp |
|---|
| Protein Length | 1036 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 643609621 |
|---|
| Product | SMC domain protein |
|---|
| Protein accession | YP_002507000 |
|---|
| Protein GI | 220930091 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0419] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAAA AGATTAAAGA GGTTAGCATC GAAGCATTTA GAGCTTATGA AAAGTTACAA
CCATTTGATT TTAGACATAA CGATAGTGGA AAAATTGCTG ATTTAGTAGT CATCTATGCA
CCTAATGGAT ATGGCAAAAC ATCATTTTTT GACGCTATAG AATGGGCAAT TACTGATGAG
ATAGGACGGC TTAAAAGCAC TGATGCAATT AAGCAAGAAG TGAAGAACGA AAAAGGGGAT
ATTTTAAAAA ATAAAAACTC TGAAGTTGCG CAAGGAACTG TTCGATTTAT AAGTGAAACC
GATGATGTTT TTGAAATAAA GACTAAAAAG CGTACTGGAA ATATGAAAAG CGATTATAGG
CCAGGTGAGC TGGAAGTTAT ATCAAAAGAT TTACAAGGAA TATTAAATGA AAAAAATACA
TTTTGCACAA CTAATATGTT GGCACATGAT AAAATAACTA GTTTTTTACA AAACTATACG
GCTGAAGATA AAACAAAAGC TTTACAAGTA TTTTGGGATA CTAATGGCTA CTCGGGAATT
CTGGAGAAAA TAAGCAATTT ATATGATGAA ATTGTAAAGA AAAAGATGGC ATTGTCTGCT
GAAGTTCTTA AGGAAAAACA AGAGTTAAAA CAGTATAAAT TTGAAACTAA TAAAGAACAT
GATGTACGAC ATTTAATTAA TGACTTTAAT TTAAACTGTA TTGATTATAT GATAAATGCA
GAAAACTTAA TTGAAAATAT TGACACTGTA TTAGAAAAAA CTACGGAAAT TTTAAAAAAA
GTACAAGAAA ATAGGAATCA ATATGAATCA AACCTTAATA CAGTAGAATT ATTAACTAAT
GAATTCCCGA ATTATTTATC TAAAAAAGAA GAATTAGAGA TTAAAAAAAG CGAAAAAAGA
GAATGTGAAA TAAAACTCCA GATCTTAAAT CAAATAGATA AGCTAATAGT GCAAAATGAA
AGATTGAAAA GTGAACAACT GGAAATTTGC GGAGTTGTAA ATAACTGGGG AATGTTTCAA
AACATTAAAT TAGAATTATT AGAAAAAAAC GATTTAAAAA AGGAAATTGC TAATTCTAAG
TCAGAATTGC AGAAAAGTAT AATCCAAATC AGAGAGAATA TCAATATATC TAAGGCGAAC
GTTGAACAAT CTGAGCAATT AAAGAAAAAG GAGTTAGAAG AAAAAAATCT GTTTGAAACT
GAATTGAGAA AATATAACGA TAATAAAGTT AATCTCAATA AATATTCTAG ATTAAATAAT
AAGGCTTCAT ATATATTAAC TAAGCGAGTA GAAAAACGAA AAATTTCGAG TGACGCCATA
AGTAGTATTG AAGTATTTAT AGAAGATAAG TGTAACATTG ATCAAATTAA GCATTATCTT
ACTGATGAAA TTTTATGTAC CAATGAAAAA CTTGTTGCTT TGAAAGGTGA AAAAGTAAAT
CAAGAGAAAA ATATTTTTCA GTTAGAGGAA CGTTATAAAA ATGCTATGCT TCTACATGAC
AAAATTAATC AATTGGTACT GCAAGGAAAA GAATTGGTAG AGGATACAAA ATCTTGTGAG
TGCCCATTAT GTCATGCAAA ATATGATGAT TTTTCTATAC TGATTGCAAG AATATCAGCA
GAATATACAA GTAGCTTAGA ATTAGATGGT ATAAAAAAGG AGCTGGATGA AGGTAGAAAA
TTAAATGTTG ATACTATTGA AAGTATTTCC AAAGAGTCCC AAAAACTAAA AACCTCTATA
CAAGATATTT TGGAAAAGAT TAAAAAAGAA TATAATAAAC AAACTGAAAG AATACATAAT
TTACAATTGC GGATAAGTGA TTGGAATAAC TTAATTACTA ATTTGCAAAA TGATAATGAA
ATTATTGAAA GAAAATATGA TGCACAAAAT ATTAGTATAC ATGATATTGA AGCAATAAAT
TTTAAAAAGG CTCAATTAGA TATGAAAGTA CTTGATTTGT CTACAAATAT AGAAGTTGAA
GAGTCAAAAA TTACTACTAG TCTAGATTTG GTTAAAAATA TAGAAACTGA ATTGAAAAAT
AAAGATCTTA AGATTGTTGA ACTTGAAGAA AAAATATCGG AACTTAAAAA TAACAATGTT
TATCAATCAA TACTAATATA TTTATCAAGC AAAAATTATA GGGAAGATAA TGATGACTTA
CAAAGTGTGT TTAAAAAAAT TGAGGAAGAA AAAAATAATG TTAGCAAAAA GATAGCCGAG
ACTGAAATGG AAATAACTGA TTCTCAGAAT AAAATTCAAG GGACAATAGA AGAGGTCAAT
CTTCAATATA ATACATTACT AATTCAGCTT CAAGAATTGG GGGCGGGTTT AGACGGGTAT
ATGTTGCGAT GCAAAAAAGC TTTTGAGAAC TCAAACGTAG AAGAAAAAGA TATTGGAGAA
CAACTAGAAA AATTAAGAGT TGCTTTCTTA TTAGAGAGAA ATAAAGTTGA TGAAAGTATA
TCTAATTTAA ATAGTATTAT TACTGATACT AAAAGTTTAA AGGAACAGAA AGTTTGGTTA
AATAAGACAA AGGAATATGA AAGAAAAAAT AGCAAATTAG ATCTTATCAA GTCCAAGTTG
GAGAATTTAG AAAAGAGTAA AACTGTTGTG GAGAATTATA TTGTTGAGCA GACAAATGAA
TATTTTAATT CAAATACAAT CAATCAGATT TATCATAAGA TAGATCCTCA TCCAACGATG
AACCATATAA AATTTCTTAC AGAGAATTCT GGAAAGGGAT TGCAAACTCA TATTTATACT
TACGATAAGT CGGAAGAAGA TAAAATGTCT CCAGTTTTGT ATTTAAGTTC GGCACAAGTT
AATATTTTAT CATTATGTAT TTTCTTAGCA AAGGTATTAA CAGAAAAAGG TACTACGTTA
AATACAATAT TTATGGATGA TCCAATTCAA CACCTTGATG GTATCAATTT GCTAGCTTTC
ATTGATTTAT TAAGGACGAT AACTACTGTT ATGGGAAGAC AAATTGTCAT ATCAACTCAT
AATGAGCATT TCTATAGTCT GATAAAGGTA AAAATGGATG ATAGATATTA TTTGTCAAAA
TTCATTGAAA TTAATAGTGT AGGAGAAATT AGAAAGACCA TAAAAGGTTA G
|
|---|
| Protein sequence | MGKKIKEVSI EAFRAYEKLQ PFDFRHNDSG KIADLVVIYA PNGYGKTSFF DAIEWAITDE
IGRLKSTDAI KQEVKNEKGD ILKNKNSEVA QGTVRFISET DDVFEIKTKK RTGNMKSDYR
PGELEVISKD LQGILNEKNT FCTTNMLAHD KITSFLQNYT AEDKTKALQV FWDTNGYSGI
LEKISNLYDE IVKKKMALSA EVLKEKQELK QYKFETNKEH DVRHLINDFN LNCIDYMINA
ENLIENIDTV LEKTTEILKK VQENRNQYES NLNTVELLTN EFPNYLSKKE ELEIKKSEKR
ECEIKLQILN QIDKLIVQNE RLKSEQLEIC GVVNNWGMFQ NIKLELLEKN DLKKEIANSK
SELQKSIIQI RENINISKAN VEQSEQLKKK ELEEKNLFET ELRKYNDNKV NLNKYSRLNN
KASYILTKRV EKRKISSDAI SSIEVFIEDK CNIDQIKHYL TDEILCTNEK LVALKGEKVN
QEKNIFQLEE RYKNAMLLHD KINQLVLQGK ELVEDTKSCE CPLCHAKYDD FSILIARISA
EYTSSLELDG IKKELDEGRK LNVDTIESIS KESQKLKTSI QDILEKIKKE YNKQTERIHN
LQLRISDWNN LITNLQNDNE IIERKYDAQN ISIHDIEAIN FKKAQLDMKV LDLSTNIEVE
ESKITTSLDL VKNIETELKN KDLKIVELEE KISELKNNNV YQSILIYLSS KNYREDNDDL
QSVFKKIEEE KNNVSKKIAE TEMEITDSQN KIQGTIEEVN LQYNTLLIQL QELGAGLDGY
MLRCKKAFEN SNVEEKDIGE QLEKLRVAFL LERNKVDESI SNLNSIITDT KSLKEQKVWL
NKTKEYERKN SKLDLIKSKL ENLEKSKTVV ENYIVEQTNE YFNSNTINQI YHKIDPHPTM
NHIKFLTENS GKGLQTHIYT YDKSEEDKMS PVLYLSSAQV NILSLCIFLA KVLTEKGTTL
NTIFMDDPIQ HLDGINLLAF IDLLRTITTV MGRQIVISTH NEHFYSLIKV KMDDRYYLSK
FIEINSVGEI RKTIKG
|
|---|
| |