| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2647 |
|---|
| Symbol | |
|---|
| ID | 7311290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 3193165 |
|---|
| End bp | 3194445 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643609572 |
|---|
| Product | signal transduction histidine kinase regulating citrate/malate metabolism |
|---|
| Protein accession | YP_002506951 |
|---|
| Protein GI | 220930042 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAACAA CCTACATTGG GGTTATACAA TTTGGGTTTT CTCTGCTCTT CGGGGTGGCA
CTATCGGTGT GCTACGCGGG CATAGAGCGA ACGCGAAAGA ACAATTTAGC TGTTGTATAC
TCTTGCGTAC TTCTCCTTTT TGTGCAGTCC TCCTGCTGGT GGCTTTTTGG TATAGATTTA
ACATCAAAAC TATATCCCCT AATTATCCAT CTGCCGTTAA TTCTTCTTCT CACCATGTAC
CTGAAACGAC CTTGGGCAAT TTCCATCGTC AGCGTGCTTT CTGCCTATCT TTGCTGTCAG
GTGCCTCGAT GGATCGGCAT CTTTGGTGGT GCTGTCTTTA GAAGCAGCCT CGTAGAGCAT
ATTTGCTATA TTGCGGCTGT GTTTTTGGCA TATTATCTTT TTCAAAGATA TGTGGCAGGT
ACTCTTCGGC AGCTCATGGA GACATCCACC AAATACTGCG TTATGCTCGG TGCTGTTCCG
CTGTTTTATT ATTTATTCGA TTACATTACC ACGATTTATA CCGATTGGCT TTACCGAGGC
ATAGATGGAG CGGTTCAGTT CATGCCCTCT TTGTTTTCAA TCGTTTATTT CGCGTTTATT
ATCCTTTACC ATGTCAAAAT GCAAAAGCAG GTGCATGCTC AGAGAGAACG AGATATGCTG
GCCGCCCAGC TCCACGGTGC ACACTCAGAG CTTGTGTCCC TGCGGCAGAT GCAGAATGTT
GCTGCCGCAT ACCGACACGA CATGCACCAT CATTTTGCAA TTTTGCAGGG CATGACTTCC
GAAGGAAGTA TAGAAAAGAT CAAAACGTAT CTAAATATTG CACAGTCCGA TATAGATGCA
ATCACCCCGA TCCGCTTTTG CGAAAACGAA ACGGTAAATT TGATTTTGTC AACCTTTTTT
ACCAAGGCAA AGCATGTTGG AATCACAATG ACGGTGGATG CGAAGCTGCC GAGTTCAATA
CCTTTAAGTG ATACAGAGCT TTGTTCCTTG CTCTCAAACG GTCTTGAAAA CGCCATTTTC
GCCGTTGCCA GACTCACTTC AGAGCATAAG GTCATATCTT TCAAAGCCAT GGTACATAAA
GCCAATCTGC TGATTCTGAT AGAAAACCCC TATGCAGGCG TAATTGTAAT GAAAGGCGGA
CTTCCTCAAT CATCTCTTGA GGGACATGGC TACGGAACGC ATAACATCTC AGCCATCGCC
GATGCCCATG GCGGTCAAGC AATTTTCAGC TCCGAGAATG GTGTATTCTC ACTAAAAATC
ATGCTTCCAC TCAGGAAGTG A
|
|---|
| Protein sequence | MITTYIGVIQ FGFSLLFGVA LSVCYAGIER TRKNNLAVVY SCVLLLFVQS SCWWLFGIDL
TSKLYPLIIH LPLILLLTMY LKRPWAISIV SVLSAYLCCQ VPRWIGIFGG AVFRSSLVEH
ICYIAAVFLA YYLFQRYVAG TLRQLMETST KYCVMLGAVP LFYYLFDYIT TIYTDWLYRG
IDGAVQFMPS LFSIVYFAFI ILYHVKMQKQ VHAQRERDML AAQLHGAHSE LVSLRQMQNV
AAAYRHDMHH HFAILQGMTS EGSIEKIKTY LNIAQSDIDA ITPIRFCENE TVNLILSTFF
TKAKHVGITM TVDAKLPSSI PLSDTELCSL LSNGLENAIF AVARLTSEHK VISFKAMVHK
ANLLILIENP YAGVIVMKGG LPQSSLEGHG YGTHNISAIA DAHGGQAIFS SENGVFSLKI
MLPLRK
|
|---|
| |