Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2574 |
Symbol | asnC |
ID | 7311227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 3098672 |
End bp | 3100066 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643609503 |
Product | asparaginyl-tRNA synthetase |
Protein accession | YP_002506882 |
Protein GI | 220929973 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000372137 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTTATA CAGAGATAAA AAGACTATTT AGGTCACCAG ATGAATATAT TGGAAAAACC ATAACAGTTC CGGGATGGGT AAGGACAGTC CGTGATTCTA AGACCTTTGG TTTTATAGAA TTAAATGACG GAACCTTCTT TAAAAATCTT CAGGTTGTAT TTGAGGATGG TAAACTTGAT AACTTTAAAG AGATTACAAA GCTCTCTGTG GGATCCTCCA TAGAGGTTGA GGGCGAATTG GTGGAAACCC CCAATGCAAA GCAGCCTTTC GAGCTAAAGG CAAAAAGGAT ATTAGTAGAG AGTTTTTGCC CTGCGGACTA CCAGTTGCAG AAGAAGAGAC ATTCCTTTGA ATTTTTGCGG ACAATCTCGC ATTTGAGACC CAGAACAAAC ACATTTTCCG CAGTTTTCAG AGTAAGGTCG CTGGCCGCTT TCGCCATACA CAAATTCTTT AATGAGAGAG GCTTTGTTTA TGTCCATACT CCCCTTATTA CAGGAAGCGA CTGTGAGGGT GCCGGACAGA TGTTCAGAGT AACAACACTG GATATGAAAA ACCCGCCAAG GCAGAAAGAG GGTGATATAG ACTATTCAAA GGACTTCTTT GAAAAGGAAA CAAGTCTTAC TGTAAGTGGT CAGCTTACAG GTGAAGCCTA TGCCTTGGCT TTTAAGAACA TATACACCTT CGGACCCACT TTTAGAGCGG AAAACTCCAA CACCGCAAGA CATGCGGCTG AATTCTGGAT GATTGAGCCT GAAATTGCAT TTGCAGATTT AAAGGATGAC ATGATCCTTG CAGAAGAAAT GCTGAAGTAT GTAATTAATT ATGTTCTGGA GAATGCTCCC GAAGAAATGC AGTTCTTCAA CAGTTTCGTA GACAAAGGAC TGCTTGAGAG GTTGGCGAAC GTTGTTAATT CCGATTTCGC ACACATTACG TATACAGAAG CTATAGAGAT TTTGGAGAAG AACAAGGACA AGTTTGAATA TCCTGTAGAA TGGGGTGTTG ATCTCCAAAC AGAGCATGAA AGATATATTA CCGAGCAGGT ATACAAGAAG CCTGTATTTG TTACCGATTA CCCGAAAGAA ATAAAGGCAT TTTATATGAG GGTTAATGAC GATAACAAGA CAGTTGCAGC CATGGACCTT CTGGTACCCG GCGTAGGTGA GATAATAGGC GGAAGCCAGA GAGAAGAGCG TCTGGATACC CTTGAAAAGA GGATGGATGA AATGGGCCTT AACAAGGAAG ATTACCAGTG GTATATTGAT CTGCGTAAAT ACGGAGGCAC AAAACATGCA GGCTTTGGTC TTGGCTTTGA GAGAGCGATT ATGTATCTTA CAGGAATAAC AAATATCAGA GACGTAATAC CTTTCCCAAG AACCACAGGA AGCTGTGAAT TCTAG
|
Protein sequence | MSYTEIKRLF RSPDEYIGKT ITVPGWVRTV RDSKTFGFIE LNDGTFFKNL QVVFEDGKLD NFKEITKLSV GSSIEVEGEL VETPNAKQPF ELKAKRILVE SFCPADYQLQ KKRHSFEFLR TISHLRPRTN TFSAVFRVRS LAAFAIHKFF NERGFVYVHT PLITGSDCEG AGQMFRVTTL DMKNPPRQKE GDIDYSKDFF EKETSLTVSG QLTGEAYALA FKNIYTFGPT FRAENSNTAR HAAEFWMIEP EIAFADLKDD MILAEEMLKY VINYVLENAP EEMQFFNSFV DKGLLERLAN VVNSDFAHIT YTEAIEILEK NKDKFEYPVE WGVDLQTEHE RYITEQVYKK PVFVTDYPKE IKAFYMRVND DNKTVAAMDL LVPGVGEIIG GSQREERLDT LEKRMDEMGL NKEDYQWYID LRKYGGTKHA GFGLGFERAI MYLTGITNIR DVIPFPRTTG SCEF
|
| |