Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2356 |
Symbol | |
ID | 7311028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 2776526 |
End bp | 2777227 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643609282 |
Product | ABC transporter related |
Protein accession | YP_002506670 |
Protein GI | 220929761 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0836286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACTTA TAAGATTTGA AAATATTAAG AAGGAATATG TAGTAGGTGA TGTCAGGATT ACGGCAGTTG ATAATTGTTC TTTTTCCATA GAAAAAGGTG AGTTGGTTGT CATACTTGGG CCGTCAGGAG CAGGGAAAAC GACAGTTTTA AATCTGCTTG GAGGTATGGA TAGCCCAAGT GGCGGAAAAA TAAAGGTTGA TGGTAATGAA ATTCATAAAT ATAACAAAAG GAAACTGGTA GATTACAGAC GTAGGGATAT AGGATTTGTA TTTCAGTTTT ATAATCTTGT GGGGAATCTC ACTGCACTTG AAAATGTTGA GCTTGCCTGT CAGATATGCC CTGATTCACT TAATCCAAAA ACGGTTTTAG AACAGGTAGG ACTATCTGAT CGTATGGGAA ACTTTCCAAG TCAATTATCG GGAGGAGAGC AGCAGAGAGT AGCTATAGCA CGGGCAATTG CAAAAAACCC AAAGTTACTT TTATGTGATG AACCAACAGG TGCGTTAGAC AGCGTAACAG GTCAGCGGAT TATTGAGCTT TTACAAAAAA CCTGTAAGGA AATGGGTATG ACCACAGTTT TAATTACTCA CAATGCAGTT ATTGCAGATA TTGCAGATAA GATTATAAAA ATAAAAAACG GTACGGTCGT GGACGTAATT AGAAACGAAA ATCCTAAAAA AGCCGCAGAG ATTGTGTGGT GA
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Protein sequence | MSLIRFENIK KEYVVGDVRI TAVDNCSFSI EKGELVVILG PSGAGKTTVL NLLGGMDSPS GGKIKVDGNE IHKYNKRKLV DYRRRDIGFV FQFYNLVGNL TALENVELAC QICPDSLNPK TVLEQVGLSD RMGNFPSQLS GGEQQRVAIA RAIAKNPKLL LCDEPTGALD SVTGQRIIEL LQKTCKEMGM TTVLITHNAV IADIADKIIK IKNGTVVDVI RNENPKKAAE IVW
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