| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2207 |
|---|
| Symbol | |
|---|
| ID | 7310895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 2580247 |
|---|
| End bp | 2581068 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643609139 |
|---|
| Product | Cof-like hydrolase |
|---|
| Protein accession | YP_002506529 |
|---|
| Protein GI | 220929620 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACAGGC TGGTGGCAAT TGATTTGGAC GGAACTTTGC TGGATAAAAA CAAGGAAATT
TCAGAAAGAA ATAAGATTGC TATACATATG GCAAAGGAAA AAGGGGTAAA GATTGTAATA
TGCTCTGGCA GAGTATATTC GGGTGCAAGA ATTTACGCAA AGCAGCTGGG TATTATGGAC
CCCATAATAG CTTGCAACGG TGCAATAATA AGAGAAAATG CCGATGGTAA AGTAATTTAC
TCCAACTATA TGCATACAGA CGACTGCCTT AAAATACTTG ATATTTTTCA TGAGAATAGC
ATCTATTTCC ATGTTTATGC AGGGGAAACA ATGTTGACTG AAAGGTTGGA TTATAATTCC
CTCAAGTATT ATGAAAGAAA TAAGGCACTT CATGCAAAGG ATAGGGTGGA AATTGACATA
GTTACAGATA TGGAGAAAAG GCTAAAGGAA CTAGATGGTA AAGTACTTAA ACTTGTTGCA
GTTTCTGATG ATTCCGAATT GTTGGCCACA GTAAGAAAAA AATTGTCCAT TGTTGAAACG
GTTGACGTAA CAAGTTCTAA CTATAATAAT TTTGAAGTTG TTAACAAGGG TGTCAACAAA
GGGAAGGCTT TAGAACGTTT GTCAAATATG TTAAAAATTC CATATCGGGA AATAATAGCT
ATTGGTGATA ATGAAAATGA TATACCTATG TTTGATTTTG CTGGACTTGG AGTTGCAATG
GGCAATGGTG AAGACTGTGC AAAAGAAGCA GCTGACTATA TTACTGCAAC AAATACCGAG
GATGGGGTAG CAAAAGCAAT AGAAAAATTC ATCCTTGGTT AA
|
|---|
| Protein sequence | MYRLVAIDLD GTLLDKNKEI SERNKIAIHM AKEKGVKIVI CSGRVYSGAR IYAKQLGIMD
PIIACNGAII RENADGKVIY SNYMHTDDCL KILDIFHENS IYFHVYAGET MLTERLDYNS
LKYYERNKAL HAKDRVEIDI VTDMEKRLKE LDGKVLKLVA VSDDSELLAT VRKKLSIVET
VDVTSSNYNN FEVVNKGVNK GKALERLSNM LKIPYREIIA IGDNENDIPM FDFAGLGVAM
GNGEDCAKEA ADYITATNTE DGVAKAIEKF ILG
|
|---|
| |