| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2077 |
|---|
| Symbol | |
|---|
| ID | 7310778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 2436296 |
|---|
| End bp | 2436889 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643609010 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_002506402 |
|---|
| Protein GI | 220929493 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000118183 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAA TAAATGAAAA CTTGTTGCAC AAGGCACGAA ATGGTGATGC TGGGGCGTTT
GAAGAGCTTA TGGTCGTATA TTATTCTAAA GTATACAATA TTTGCTACAG GATGCTAAAT
AACACCGAAG ATGCATATGA ACAGGCTCAG GAGACATTTA TAAAAGCTTT CAAATACATA
AAGGACTTTA AGGGAAATTG TGCCATATAT ACGTGGCTTT ATAGGATTGC AACCAATGTA
TGTCTGGACT ATATTAGAAA AAACAAGAAA AGGAAGGAAG TCTCAATAGA ACAGAGTACT
TTTGAGGATT TGCAGCTCAA AGACAGTCTG GTTTCAGATA TTCCCGGGCC TGAGAAGATA
GCAGAGGATA ATGCCCGGAA ACAGGCAATA AGGACAGCCA TGACAAAAAT GAATGAAAAA
AATCGTTTGG TCATAATACT ACGTGACTTT ATGGGTCTTA GTTACGACGA AATATCCGAA
ATAATAAAAA TTCCTGTTGG CACAGTAAAA TCAAGAATCA GCAGAGCCAG AAACGAATTA
AGGGAATTGT TATGCAAGGA TAAGGAACAT TTATTTACGG ATTACGTCAA ATAA
|
|---|
| Protein sequence | MEKINENLLH KARNGDAGAF EELMVVYYSK VYNICYRMLN NTEDAYEQAQ ETFIKAFKYI
KDFKGNCAIY TWLYRIATNV CLDYIRKNKK RKEVSIEQST FEDLQLKDSL VSDIPGPEKI
AEDNARKQAI RTAMTKMNEK NRLVIILRDF MGLSYDEISE IIKIPVGTVK SRISRARNEL
RELLCKDKEH LFTDYVK
|
|---|
| |