| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2061 |
|---|
| Symbol | |
|---|
| ID | 7310764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 2419387 |
|---|
| End bp | 2420160 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643608995 |
|---|
| Product | sporulation sigma factor SigG |
|---|
| Protein accession | YP_002506387 |
|---|
| Protein GI | 220929478 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
|---|
| TIGRFAM ID | [TIGR02850] RNA polymerase sigma-G factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000147139 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTATCA ATAAAGTTGA AATTTGTGGT GTTAATACAT CTAAACTTCC TGTTCTTACC
AATGAACAGA AAAAAGAACT GTTTGAAAGA ATGCATAAAG GCGATAATTC TGCTAGAGAT
GAGTTTATAA AAGGAAATCT CAGGCTTGTA TTAAGTGTTA TTCAGAGGTT TAATAATAGA
GGAGAATATG TGGATGATTT GTTTCAGGTA GGCTGTATAG GTTTAATTAA ATCTATAGAT
AATTTTGATG TAACCCAGAA TGTCAAGTTT TCAACATATG CTGTTCCAAT GATAATCGGA
GAAATCAGAA GATATTTAAG AGACAACAAC TCCATAAGAG TAAGTCGTTC CCTAAGAGAC
ATTGCATATA AGGCATTACA GGCTAAGGAG AGGCTTACAA CCCAAAATTC TAAAGAGCCT
ACTATAGTGG AGCTGGCTCA GGAGCTTCAG CTTCCCAAGG AGGACATTGT TTTTGCATTG
GATGCGATTC AGGACCCTAT ATCTTTATTT GAGTCCGTTT ACCATGACGG AGGAGATGCC
ATTTATGTGA TGGATCAAGT CAGTGATGAC AAGAATATTG ACGAGAATTG GCTTGAAACC
ATTTCTCTGA AAGAGGCTAT GCGTAAACTC AATGACAGGG AAAAATTAAT TTTGAATCTT
AGATTTTTTG AAGGAAGAAC CCAGATGGAA GTTGCAGATG AAATAGGGAT TTCTCAGGCA
CAGGTATCAA GACTCGAAAA GACTGCATTA ATGCATATGA AGAAGTATAT TTAG
|
|---|
| Protein sequence | MLINKVEICG VNTSKLPVLT NEQKKELFER MHKGDNSARD EFIKGNLRLV LSVIQRFNNR
GEYVDDLFQV GCIGLIKSID NFDVTQNVKF STYAVPMIIG EIRRYLRDNN SIRVSRSLRD
IAYKALQAKE RLTTQNSKEP TIVELAQELQ LPKEDIVFAL DAIQDPISLF ESVYHDGGDA
IYVMDQVSDD KNIDENWLET ISLKEAMRKL NDREKLILNL RFFEGRTQME VADEIGISQA
QVSRLEKTAL MHMKKYI
|
|---|
| |