Gene Ccel_2038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_2038 
Symbol 
ID7312315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp2396836 
End bp2398044 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content39% 
IMG OID643608972 
Productflagellar motor switch protein 
Protein accessionYP_002506364 
Protein GI220929455 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation 
TIGRFAM ID[TIGR02480] flagellar motor switch protein FliN 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0278595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGATA TGCTTACACA AGCAGAGATA GATGCATTAT TAAATGGTAC TTCCTCTTCA 
GAAGAACCAG AAGATGCAAC AGGCAGCAGT GATACAACCG GGACATTGAC ATCACAGGAA
ATTGATGCAC TGGGCGAAAT CGGAAATATA AGCATGGGTA CTTCTGCAAC TACTTTATTT
ACTTTATTAT CCCAGAAGGT TACCATAACC ACTCCTAATG TAACACTTTC TACGTGGGAA
GATTTATCAA AAAATTATTC TTCTCAGTAT GTTGCGGTAA AAGTGGAATA CACAGATGGA
TTGATCGGCT CTAACCTATT AATCTTAAAA CAGGATGATG TTAAGATCAT TACTGACTTG
ATGATGGGGG GAGAAGGTGT AAAAATAGAG GGTGATCTGA CGGATCTTCA TTTAAGTGCA
ATCAGTGAGG CCATGAACCA AATGATCGGC TCTTCAGCTA CATCTATGTC AACAGTCTTT
TGTAAGAGGA TTGACATATC ACCACCAAAA GCTTACATTA TAAGTTTTGA CAGCAGTGAT
CCTTATGGTG ATTTTAAGCA GGATGAGCAA TTGGTAAAAG TTGCATTTAA AATGGTTGTG
GGGAACTTGA TTGATAGTGA GATAATGCAA TTGCTGCCGA TTAAGTTTGC AAAGGAGCTT
GTATCGTCTT TACTTAATTC AACTGAAACT AAACAAGATC CCGTAAAAGT TGAACCACCT
CAAGCACCTC AAGCACCTGT TCCATCACAG ATGGCTCCAT CGTTCGACAA TCAGAATTCA
TACATTGAGC CACCTTTACA GCCAGTAATG CAGCCTCAAA TTCCACAGCC GATGATGCAA
CAATCTATGC CTAACTTTGG TTATGACGGA GTTTATCAGG AACCGCAAAG ACAAAGAGCT
CCTGTAAACG TTCAGCCTGC ACAATTTCAG GCTTTTGATG ATGGGCTTTC AGTAACAGAG
AAAAAGAACA TAAGCCTTAT TATGGACTTG CCCTTACAAG TAACAGTTGA ACTGGGTAGA
ACTCAAAAAT TAATAAAGGA TATACTTGAG TTTGGGTCTG GTTCAGTAAT TGAGCTTGAT
AAACTGGCAG GTGAGCCGGT TGATATATTA GTCAACGGTA AAGCTATTGC TAAGGGAGAA
GTAGTTGTTA TTGATGAAAG CTTTGGTGTA AGGATTACAG ATATAATTCA TCCATCAAAA
CGATTATAG
 
Protein sequence
MGDMLTQAEI DALLNGTSSS EEPEDATGSS DTTGTLTSQE IDALGEIGNI SMGTSATTLF 
TLLSQKVTIT TPNVTLSTWE DLSKNYSSQY VAVKVEYTDG LIGSNLLILK QDDVKIITDL
MMGGEGVKIE GDLTDLHLSA ISEAMNQMIG SSATSMSTVF CKRIDISPPK AYIISFDSSD
PYGDFKQDEQ LVKVAFKMVV GNLIDSEIMQ LLPIKFAKEL VSSLLNSTET KQDPVKVEPP
QAPQAPVPSQ MAPSFDNQNS YIEPPLQPVM QPQIPQPMMQ QSMPNFGYDG VYQEPQRQRA
PVNVQPAQFQ AFDDGLSVTE KKNISLIMDL PLQVTVELGR TQKLIKDILE FGSGSVIELD
KLAGEPVDIL VNGKAIAKGE VVVIDESFGV RITDIIHPSK RL