Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2038 |
Symbol | |
ID | 7312315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 2396836 |
End bp | 2398044 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643608972 |
Product | flagellar motor switch protein |
Protein accession | YP_002506364 |
Protein GI | 220929455 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation |
TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0278595 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAGATA TGCTTACACA AGCAGAGATA GATGCATTAT TAAATGGTAC TTCCTCTTCA GAAGAACCAG AAGATGCAAC AGGCAGCAGT GATACAACCG GGACATTGAC ATCACAGGAA ATTGATGCAC TGGGCGAAAT CGGAAATATA AGCATGGGTA CTTCTGCAAC TACTTTATTT ACTTTATTAT CCCAGAAGGT TACCATAACC ACTCCTAATG TAACACTTTC TACGTGGGAA GATTTATCAA AAAATTATTC TTCTCAGTAT GTTGCGGTAA AAGTGGAATA CACAGATGGA TTGATCGGCT CTAACCTATT AATCTTAAAA CAGGATGATG TTAAGATCAT TACTGACTTG ATGATGGGGG GAGAAGGTGT AAAAATAGAG GGTGATCTGA CGGATCTTCA TTTAAGTGCA ATCAGTGAGG CCATGAACCA AATGATCGGC TCTTCAGCTA CATCTATGTC AACAGTCTTT TGTAAGAGGA TTGACATATC ACCACCAAAA GCTTACATTA TAAGTTTTGA CAGCAGTGAT CCTTATGGTG ATTTTAAGCA GGATGAGCAA TTGGTAAAAG TTGCATTTAA AATGGTTGTG GGGAACTTGA TTGATAGTGA GATAATGCAA TTGCTGCCGA TTAAGTTTGC AAAGGAGCTT GTATCGTCTT TACTTAATTC AACTGAAACT AAACAAGATC CCGTAAAAGT TGAACCACCT CAAGCACCTC AAGCACCTGT TCCATCACAG ATGGCTCCAT CGTTCGACAA TCAGAATTCA TACATTGAGC CACCTTTACA GCCAGTAATG CAGCCTCAAA TTCCACAGCC GATGATGCAA CAATCTATGC CTAACTTTGG TTATGACGGA GTTTATCAGG AACCGCAAAG ACAAAGAGCT CCTGTAAACG TTCAGCCTGC ACAATTTCAG GCTTTTGATG ATGGGCTTTC AGTAACAGAG AAAAAGAACA TAAGCCTTAT TATGGACTTG CCCTTACAAG TAACAGTTGA ACTGGGTAGA ACTCAAAAAT TAATAAAGGA TATACTTGAG TTTGGGTCTG GTTCAGTAAT TGAGCTTGAT AAACTGGCAG GTGAGCCGGT TGATATATTA GTCAACGGTA AAGCTATTGC TAAGGGAGAA GTAGTTGTTA TTGATGAAAG CTTTGGTGTA AGGATTACAG ATATAATTCA TCCATCAAAA CGATTATAG
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Protein sequence | MGDMLTQAEI DALLNGTSSS EEPEDATGSS DTTGTLTSQE IDALGEIGNI SMGTSATTLF TLLSQKVTIT TPNVTLSTWE DLSKNYSSQY VAVKVEYTDG LIGSNLLILK QDDVKIITDL MMGGEGVKIE GDLTDLHLSA ISEAMNQMIG SSATSMSTVF CKRIDISPPK AYIISFDSSD PYGDFKQDEQ LVKVAFKMVV GNLIDSEIMQ LLPIKFAKEL VSSLLNSTET KQDPVKVEPP QAPQAPVPSQ MAPSFDNQNS YIEPPLQPVM QPQIPQPMMQ QSMPNFGYDG VYQEPQRQRA PVNVQPAQFQ AFDDGLSVTE KKNISLIMDL PLQVTVELGR TQKLIKDILE FGSGSVIELD KLAGEPVDIL VNGKAIAKGE VVVIDESFGV RITDIIHPSK RL
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