| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2006 |
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| Symbol | |
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| ID | 7312311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | - |
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| Start bp | 2368390 |
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| End bp | 2369493 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643608940 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_002506333 |
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| Protein GI | 220929424 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0408562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATAC ATGAGTTTTA TATGAAAAGG ACATTGGAAA TTGCAAAAGA AGGGTGGGGC
AGAACAAACC CCAATCCATT GGTGGGAGCT GTTATAGCAA AAAACGGCAA AATAATTTCT
GAAGGTTTCC ATGAAGCCTT GGGGTGTGCC CATGCCGAGG TTTGTGCTTT TAGTAATGCC
CCCACGGATA TTTCAGGGGC TACTCTTTAT GTAAATCTTG AGCCGTGCTC CCATTACGGA
AGGACGCCTC CGTGTGTAAA AGCGATTATA GACTCCGGTA TAAAGGAAGT AGTTGTTGCC
ATGGTAGACC CAAACCCCAA GGTCTCAGGA AAAGGCATAC AAATGCTAAA GGATGCCAAT
ATTAATGTAA TAGTGGGAGT GCTTGAGGAA GAAGCAAAAA AACTCAATGA GATATTTATA
CACTATATAA CAAAACGACT TCCATTTGTA ATTATGAAAA CGGCAATGAC GTTAGACGGT
AAAATTGCAT CGGTTACAGG TGACTCCAAA TGGATAAGCG GTGAATACTC AAGGGAGTAT
GTACATGCTA TCCGTAACAG AGTATCGTCG ATTATGGTTG GTGTAAATAC AGTAATAAAC
GATAATCCTT CATTGACTGC AAGACCAATT TCAGGAAAAG GGATTGATCC TGTCAGAATT
GTAGTAGACA GCAGCGGAAG GATTCCCATA GAAAGCAGGG TTATCCAGAG CGATTCAGAG
GCAGGACTTA TACTTGCTAC TACAGAAAAA ATCCATAAAG ACAAGGAAAC TCAGCTTTTA
TCTCGTGGGG TAAGGATTAT AAAAACGGCC CCAAAAAATG GAAAAGTAAA TCTCAGGGAG
CTTATGGAGG AATTGTACAA GCTGGAAATT GACAGTGTTC TTTTGGAGGG AGGCGGTACC
CTTAACTTTT CGGCACTTGA GGCAGGTATA GTAAATAAGG TAATGACCTT TATTTCACCC
AAAATAATAG GCGGTAGTTC GGCTGTAACG CCTGTAGGGG GGAAAGGAAT AGAAAAAATG
AAGGATGCCA TAGCTCTGTC GGATATCAGA GTTGAAAGGT TTGACAGAGA TGTACTTATT
GAGGGATATG TTGCAGACAA ATAG
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| Protein sequence | MNIHEFYMKR TLEIAKEGWG RTNPNPLVGA VIAKNGKIIS EGFHEALGCA HAEVCAFSNA
PTDISGATLY VNLEPCSHYG RTPPCVKAII DSGIKEVVVA MVDPNPKVSG KGIQMLKDAN
INVIVGVLEE EAKKLNEIFI HYITKRLPFV IMKTAMTLDG KIASVTGDSK WISGEYSREY
VHAIRNRVSS IMVGVNTVIN DNPSLTARPI SGKGIDPVRI VVDSSGRIPI ESRVIQSDSE
AGLILATTEK IHKDKETQLL SRGVRIIKTA PKNGKVNLRE LMEELYKLEI DSVLLEGGGT
LNFSALEAGI VNKVMTFISP KIIGGSSAVT PVGGKGIEKM KDAIALSDIR VERFDRDVLI
EGYVADK
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