Gene Ccel_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1988 
Symbol 
ID7310699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp2354358 
End bp2355695 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content38% 
IMG OID643608923 
Productglycosyl transferase family 2 
Protein accessionYP_002506316 
Protein GI220929407 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAGA CAACGACAAC TAAGTTAAAG ACTAAGAAAA AAATCTATAT CCCTGTAAAA 
AATAAGTTTA TTATAAGCAT GATTGCGGGA ATAGCTTGGA TGGCGACATC TATATATTTT
TCCGTACCGT GGATAAAGGA TTTGTCACTT TACGTAACTA TGCCAATTGC AATTTTGATT
ATTGCCGGTA TAGCATATAT CCCCGGATAT ATGAACGCAT TCATGGTATC AAGCCTTTTA
TTGGACAGAC AGCCAAAAGT AAAAAATACT AGTCCCAAAG TCCCGGTAAC CATACTGATT
GCATGTTATA ATGAGGAAAA AAGTATTGAG AATACCGTTA ATTATGTGGC AACACAGGAT
TATGAGGGAG AAATAAGGCT AATAGTTATA GATAATAATT CAAAGGATAA AACAGCTGAG
ACAGCAAAAA AAGCCGGGGA AAAAATGAAC CTCAATCTGA CTGTAGTACA CGAAAGTAAA
GCCGGAAAGA ATTTCGCTTT AAATACTGCA TTAGCACACG TCGAAACGGA ATATGTTCTG
ACACTGGATG CAGATACCTT ACTGCATAAA TCAGCTTTAA GGCATATTGT TGCACGTTTG
GAAAGTTCAC CAGATGATGT ATGTGCGGTG GCAGGAACTG TTCTGGTCAG GAACAGCAGA
GGAAATATAC TTGCAAGGAT TCAGGAATGG GACTATTTTT TAGGAATTGC CAGTATAAAA
AGATTGCAGG GATTGTTTCA AAGCACTTTG GTAGCACAGG GGGCTTTTTC ACTGTATAAA
ACTGAATTAA TAAGGAAGGT TGGGGGATGG CCCGATGCAA TTGGCGAGGA TATTGTTCTG
ACATGGAGTT TTTTAAGTAA TAATTGCAGA GTTTATTTTG AGCCCATGGC AGTAGCATTT
ACAGATGTCC CAACTTCCTT AAAGCATTTC TTTAGACAAC GAAGCAGGTG GGCAAGAGGA
ATGGTTGAAG CTTTGAAGCT ATTCAAGCCA TGGTCGCAGC CAATTTATTC TGCAAGATAT
CTTACCGGAT GTAATCTTTT TATGCCGTTT ATGGATTTTG TTTACACGTT TTGCTGGCTT
CCCGGGTTGG TATTGGCTTT TTTTGGACAC TTTTGGATTG TGGGACCGGC AACACTCTTT
GTAATACCAC TTGCATTACT TCAGAATTTC GTACTGTATA CCTATCAAAA AGGTGTTTTC
AAATCATTAA ACCTTCGGGT CAGGAAAAAT ATTATAGGAT TTATTTTATA TGTTTTATGT
TACCAGTTAT TAATGAGTCC TATTTCTGTT TGGGGATATA TTCAGGAAAC ACTCAAGCTT
CGAAGAATTT GGAAATAA
 
Protein sequence
MKQTTTTKLK TKKKIYIPVK NKFIISMIAG IAWMATSIYF SVPWIKDLSL YVTMPIAILI 
IAGIAYIPGY MNAFMVSSLL LDRQPKVKNT SPKVPVTILI ACYNEEKSIE NTVNYVATQD
YEGEIRLIVI DNNSKDKTAE TAKKAGEKMN LNLTVVHESK AGKNFALNTA LAHVETEYVL
TLDADTLLHK SALRHIVARL ESSPDDVCAV AGTVLVRNSR GNILARIQEW DYFLGIASIK
RLQGLFQSTL VAQGAFSLYK TELIRKVGGW PDAIGEDIVL TWSFLSNNCR VYFEPMAVAF
TDVPTSLKHF FRQRSRWARG MVEALKLFKP WSQPIYSARY LTGCNLFMPF MDFVYTFCWL
PGLVLAFFGH FWIVGPATLF VIPLALLQNF VLYTYQKGVF KSLNLRVRKN IIGFILYVLC
YQLLMSPISV WGYIQETLKL RRIWK