Gene Ccel_1864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1864 
Symbol 
ID7310587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp2218524 
End bp2219699 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content37% 
IMG OID643608795 
ProductSensor DegS domain protein 
Protein accessionYP_002506192 
Protein GI220929283 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000165606 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAGCT ATAAACACAA TTCTGTACAG ATGAATGAAA TAATTTCAAA GACAATAAAA 
TCTCTTAAAT CCGGTAAAAA TGAGATTATT GAAATTGCTG AGAATTCCAG AAAAGAATGC
AAGAGACTTG AAGATGAACT GGTAACATTA AAAAGTCAGG TATTTGAAAT TGTCAGTGTA
ATTGAAAATT TGGAACATGA TCTTAAACAG AGCAAAAAGA AACTGTATGA CGTTAATAAG
GATTTCAACA GTCATAGCCA GAATGAGCTT GCTCAGGCGT ATCAGTCAGC TGACAATATA
AGGGTTGAAC TTGCTGTAAG GCGTGAACAG GAGACTTTTC TTATAAGAAG AAGAAACGAC
CTTGAAATAA GAATTCGGGA TTGTTTAAAA ACACTTGAAA GGGCAGATAG TCTTATAGGA
CATGTGGGGA TTGCACTGGA CTACTTAAGC GGTGATCTTC AAAACGTAGG AGAGCAGTTG
GACAATTTGC AGCAGAGACA ATTCTTGGGC ATCAAGATTA TAGAGGCTCA GGAGGAAGAA
CGCAAAAGGG TAGCCAGAGA AATACACGAT GGTCCTGCAC AATCTATGTC AAATATTGTA
ATAAAAGCCG AAATTTGTGA AAGGCTATTA GATAAAGATA TTGACGAAGC AAGGAAAGAA
TTGCAGAATC TAAAAAAGGT TATGAGAGAT AGTCTTCAGG AGGTCAGAAA GATAATATAC
AACCTGAGAC CAATGGCCCT TGACGATTTA GGCTTACTGC CCACTTTGGA GCGTTATGTA
ATTTCTTTCA GAGAAGAAAC CGGAATAGAT GTTCAGCTGA GATCCAGAGC AATAAATGAA
GAGATTAAAT CCGTTATATC TCTTGCTGTG TTCAGAATTG TTCAGGAAGC CTTGAATAAT
GTACTAAAAC ACGCACAGGC TAAAAGAGTT TCAATTCTTT TAGAGCATGT CAATAAGAAA
TTAAATATAA TTATTGTAGA TAATGGTGTT GGATTTAACA CTGACGATGT TAAGGTAATA
GAACCTGAAA GTACTGGTGG GTTTGGTCTT TTTAGCATGA AAGAGAGGGT GGCCCTGCTT
GAAGGAGAGG TGAATATAGT ATCACAGGTA GGAATAGGAA CAAAGATAAA AATTCATATA
CCATTAATGG ATGAAGGGGA GGACACTCAA AAATGA
 
Protein sequence
MRSYKHNSVQ MNEIISKTIK SLKSGKNEII EIAENSRKEC KRLEDELVTL KSQVFEIVSV 
IENLEHDLKQ SKKKLYDVNK DFNSHSQNEL AQAYQSADNI RVELAVRREQ ETFLIRRRND
LEIRIRDCLK TLERADSLIG HVGIALDYLS GDLQNVGEQL DNLQQRQFLG IKIIEAQEEE
RKRVAREIHD GPAQSMSNIV IKAEICERLL DKDIDEARKE LQNLKKVMRD SLQEVRKIIY
NLRPMALDDL GLLPTLERYV ISFREETGID VQLRSRAINE EIKSVISLAV FRIVQEALNN
VLKHAQAKRV SILLEHVNKK LNIIIVDNGV GFNTDDVKVI EPESTGGFGL FSMKERVALL
EGEVNIVSQV GIGTKIKIHI PLMDEGEDTQ K