Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1743 |
Symbol | |
ID | 7310479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 2090796 |
End bp | 2091503 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643608672 |
Product | pseudouridine synthase |
Protein accession | YP_002506074 |
Protein GI | 220929165 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGGGAA TCAGATTGCA GAAATTTATA GCACATGCGG GAGTTGCCTC AAGAAGAACA GCCGAAGAAA TGATAAAACA GGGCAGGGTA GCGGTAAATA ATACTGTTGT GCAGGACATG GGGTTCACTG TTTCAAATGA TGATTTTGTA ACAGTAGATG GAAAGCCTGT TAAAATTGAA GAGGAAAAAG TTTATATAAT GCTGCACAAG CCTGTGGGTT ATGTTTCTAC TAGCCAAGAC CAGTTCGGAA GACCGACGGT TGTTGATCTG GTTAAGGATG CGGGAAAAAG ACTGTATCCC GTTGGACGTC TGGACTATGA CACGTCAGGG CTTATTCTAC TCACAAATGA CGGTGATTTT ACTTACCGCC TTACACACCC AAAGCATGAA ATAAATAAGG TTTACGAAGC CGTAATTTCG GGTTTTCCTG AAAAGAATGA AATTAAGAGT TTTGAGTCTG GGTTAAAAAT AGAGAATTAT CAAACTTCTC CAGCAGAATT TGTGGTTTTA GAGAAACAGG GAATTAATAC CCTTGTACGC ATTACCATCC ATGAAGGCAA GAACAGACAG GTGAGAAAGA TGTGCGAAGC CATAGGCCAC AAGGTTCTGA CATTAAAGCG AATTCAAATA GGGCCTATAG CTCTTGATAA CCTTCCAGTG GGAAAGTGGA GACATCTCTC TTTAAGAGAA CTAAAAATGC TTTATTAA
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Protein sequence | MLGIRLQKFI AHAGVASRRT AEEMIKQGRV AVNNTVVQDM GFTVSNDDFV TVDGKPVKIE EEKVYIMLHK PVGYVSTSQD QFGRPTVVDL VKDAGKRLYP VGRLDYDTSG LILLTNDGDF TYRLTHPKHE INKVYEAVIS GFPEKNEIKS FESGLKIENY QTSPAEFVVL EKQGINTLVR ITIHEGKNRQ VRKMCEAIGH KVLTLKRIQI GPIALDNLPV GKWRHLSLRE LKMLY
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