Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1680 |
Symbol | glyA |
ID | 7310424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 2023483 |
End bp | 2024721 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643608608 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_002506011 |
Protein GI | 220929102 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACAATA TTGATACGAT AAAGAAGATT GATTCTCAAT TAGCAGAAGC TATTGAGTTA GAAGTCAACA GACAGAGAAA TAAAATAGAA TTAATTGCTT CAGAGAATTT TGTAAGTGAT GCTGTTATAG AGGCACTTGG AACACCCTTA ACAAATAAAT ACGCGGAAGG TTATCCTGGA AAAAGATATT ATGGCGGATG CGAATATGTA GATATAGTTG AACAACTTGC TATTGACAGA GCAAAGCAGA TTTTTGGTGC AGAACATGCA AATGTTCAGC CTCATTCTGG AGCACAGGCA AATACAGCTG TTTACTTTGC TTTTCTAAAT CCCGGAGATA CAATTCTGGG AATGAACCTT GCACACGGGG GACATTTAAG CCATGGCAGT CCCGTTAACA TATCCGGTAA GTACTATAAG GTAGTACCAT ACGGTGTAAG AGAGGACAAC TGCTACATTG ATTATGATGA GTTGAGAAAA ACCGCTAAGG AAAACTCACC CAAAATAATT GTAGCAGGAG CAAGTGCATA TCCAAGAATA CTAGATTTTA AGGCATTCAG GGAGATTGCT GATGAAGTTG GAGCAATTCT AATGGTTGAT ATGGCTCACA TAGCAGGTCT TGTTGCTGCC GGAGTGCACC CAAGTCCTGT TCCATATGCT GACGTTGTAA CAACTACAAC TCACAAGACA TTAAGAGGCC CAAGAGGCGG TATGATTCTC TGCAAGCAGG AATATGCCAA GAAAATCGAC AGTGCTGTGT TCCCTGGGAA TCAGGGTGGT CCATTGATGC ACGTTATTGC CGCTAAAGCA GTAAGCTTTA AGGAAGCTCT TACTGATGAT TTCAAAATAT ATCAGCAAAA CATTGTAAAA AATGCAAAAG CTTTGGCTTC TGCTCTTATG GAAAAGGGCT TTAAGCTAGT TTCAGATGGC ACCGACAACC ACCTTATGCT TATTAACCTG ACAAATATGA ATATTACGGG TAAGGAAGCA CAGCATAAGT TAGATGAGGT CTGCATCACA TGTAACAAAA ACGGTATTCC TTTTGATACT CAGAGTCCAT TTATTACAAG CGGTATAAGA CTTGGTACTC CGGCTGTAAC AAGCAGAGGA ATGAATGAGG AAGATATGAA AGAGATTGCA GACTTAATTC ATCTCACAAT TTCAGATTTT GAAAATTCAA GGACGAATAT AATAAGAAGA GTTGAGGCTC TTTGTAATAA ATATCCTTTA TATGAATAA
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Protein sequence | MYNIDTIKKI DSQLAEAIEL EVNRQRNKIE LIASENFVSD AVIEALGTPL TNKYAEGYPG KRYYGGCEYV DIVEQLAIDR AKQIFGAEHA NVQPHSGAQA NTAVYFAFLN PGDTILGMNL AHGGHLSHGS PVNISGKYYK VVPYGVREDN CYIDYDELRK TAKENSPKII VAGASAYPRI LDFKAFREIA DEVGAILMVD MAHIAGLVAA GVHPSPVPYA DVVTTTTHKT LRGPRGGMIL CKQEYAKKID SAVFPGNQGG PLMHVIAAKA VSFKEALTDD FKIYQQNIVK NAKALASALM EKGFKLVSDG TDNHLMLINL TNMNITGKEA QHKLDEVCIT CNKNGIPFDT QSPFITSGIR LGTPAVTSRG MNEEDMKEIA DLIHLTISDF ENSRTNIIRR VEALCNKYPL YE
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