Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1549 |
Symbol | |
ID | 7310313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1897151 |
End bp | 1899085 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643608478 |
Product | putative outer membrane protein |
Protein accession | YP_002505881 |
Protein GI | 220928972 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAGG AATTTCATGT TGCGGTTACC GGATGTGATT TTGCAGAGGG TACTAAAGAG AATCCTTTCA GAACAATATC AAAAGCTGCT AAGGTAGCTG AATCTGGAGA TAAAGTTATA GTTCACGAGG GAGAGTACCG TGAATGGGTA AAGCCTGAGC ATGGCGGCGA AAGCAATATC AACAGGATTA CATATGAAGC AGCTGAGGGT GAAAAGGTTG TTATAAAGGG CTCCGAGAAA ATACAGAGTT GGGAAAATTT AGAAGGAACA GTCTGGAAAG TAGTTCTGCC AAATTCCTTC TTCGGTGATT ACAATCCGTA CAAGGAGATT CTCAGTGGCG ATTGGCTTAT ATATAAGCCG GGTATTTATC GTCATGCCGG GGATGTTTAT TTAAACGGAG TCTCTTTTTA TGAGGCTGAT TCTTTGGATG AAGTTAAAAA TCCTGTTGTG AGAACCGGGG TGGTAGATAT CCCGTGGACT CAGAACTTTG AAAAAATTCT GCATCCTGAG CAAACAATTT ACCGTTGGTA CAGCGAAGTG GATGATGAAA AAACTACCAT TTACGCAAAC TTTCATGGTG TAGATCCAAA TAAAGAACTT GTTGAAATTA ATGTAAGAAA ATGTTGTTTC TATCCAACCA TAACAGGTCT GAATTATATT ACTGTAAGAG GGTTTGAGAT GGCACAGGCT GCCTCTCCAT GGACTCCGCC TACGGCAGAT CAACCCGGTC TGTTGGGTGC AAACTGGAGT AAGGGCTGGA TTATAGAAAA CAACATTATC CATGATGCTA AATGCAGTGC CATCAGTATT GGCAAGGAAG CGTCAACCGG ACATAATCTT TGTACTAGAA AACACCGGAA GCCAGGTTAT CAGTATCAGA TGGAATCTGT TTTCCGTGCT AAACAGATCG GTTGGAGTAA GGAAAAGATA GGTTCACATA TCATCCGTAA CAACGTTATT TATGATTGTG GTCAAAATGG TATCGTAGGT CATATGGGCT GCGTTTTCAG TGAAATTTAT AATAACCATA TTTATAATAT CGGAGTTAAG CATGAGTTTT TCGGCTACGA AATTGGAGGT ATAAAGCTTC ATGCAGCGAT TGATGTAAAA ATTCATCATA ACCGTATTCA TAATTGTTCT CTTGGTACTT GGCTCGACTG GCAGGCACAA GGCGTTCGAG TCAGTAATAA CCTATATTAC AACAATGACC GCGACTTAAT GATAGAAGTA ACCCATGGTC CACATTTAGT GGATAACAAT ATTTTTGCTT CAGACTATTC CTTGGATAAT TTTGCACAAG GCGGAGCATA TGTAAATAAT CTTTACTGCG GTAAGCTCTA TTTATCGAAG GTACTTGACA GATCTACCCC ATATCATTTC CCGCATAGTA CAGATGTAGC CGGTTCAGCA GTGGTATACG GCGGAGATGA CCGTTTTTAC AATAATATTT TTGTTGGCGG TAAAGATATA GAGAACAGTG GTACAGCAGG ATATAATCCT CATACTGCAT CATTTGAAGA GTATGTTTCC GACGTGCTTA GTCATGGAGT TGGTGACCAC GAGGTGTTTA TGTTAACCGA ACAACCGGTA TACATTTCAT CAAATGCATA TTTAAACGGA GCTGAAGGCT TTGATCGTGA AAAGAACGGT TATACTAATA AATTATTTGA TCCAAATGTA AAAATCGTTG AAGAAGGAAA CGAAGTATAT CTGGAGATGA ATGTAGAAAA AGATATGCTG GAAATACCGA CAGAAATCAT TTCTACTGAA ACCCTTGGTA ACGTGCGTAT TGTTGATGCC ATTTTTGATG ACCCTAACGG AAATTCAATC ATAATGGACA CCGACTATAC AGGAATGGCC AGAACAGCTA AGCCTGTAGT AGGACCAATC GAAGGATTGA AATCAGGATT CAACCGCATT AAAGTTTGGG GTTAA
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Protein sequence | MNKEFHVAVT GCDFAEGTKE NPFRTISKAA KVAESGDKVI VHEGEYREWV KPEHGGESNI NRITYEAAEG EKVVIKGSEK IQSWENLEGT VWKVVLPNSF FGDYNPYKEI LSGDWLIYKP GIYRHAGDVY LNGVSFYEAD SLDEVKNPVV RTGVVDIPWT QNFEKILHPE QTIYRWYSEV DDEKTTIYAN FHGVDPNKEL VEINVRKCCF YPTITGLNYI TVRGFEMAQA ASPWTPPTAD QPGLLGANWS KGWIIENNII HDAKCSAISI GKEASTGHNL CTRKHRKPGY QYQMESVFRA KQIGWSKEKI GSHIIRNNVI YDCGQNGIVG HMGCVFSEIY NNHIYNIGVK HEFFGYEIGG IKLHAAIDVK IHHNRIHNCS LGTWLDWQAQ GVRVSNNLYY NNDRDLMIEV THGPHLVDNN IFASDYSLDN FAQGGAYVNN LYCGKLYLSK VLDRSTPYHF PHSTDVAGSA VVYGGDDRFY NNIFVGGKDI ENSGTAGYNP HTASFEEYVS DVLSHGVGDH EVFMLTEQPV YISSNAYLNG AEGFDREKNG YTNKLFDPNV KIVEEGNEVY LEMNVEKDML EIPTEIISTE TLGNVRIVDA IFDDPNGNSI IMDTDYTGMA RTAKPVVGPI EGLKSGFNRI KVWG
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