Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1533 |
Symbol | |
ID | 7312246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1868114 |
End bp | 1869163 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643608461 |
Product | ribosomal RNA large subunit methyltransferase N |
Protein accession | YP_002505865 |
Protein GI | 220928956 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATAAATT TAATGAATAT GACTTTGGAG GAACTTGAGC AGATGCTGTC AGAGATGGGA CAGCAGAAAT TCAGGGCAAA GCAGATTTTT AAATGGATAA ACAGCGGAAT CAGATCATTT TCTGATATGA CTAATATCTC AAAGCAATTA AGAGATGAAT TAGAAAAAGT TTCAAAAATC AGCAGGTTAA AAATAGTCGA TAGGCTGCAA TCAAAGATTG ATTCCACTGT CAAGTATTTA TTTGAGCTGG AGGACGGCAA TATTATTGAA AGTGTTCTCA TGGAGTACAA GCATGGTTTT ACAGCCTGTA TCTCGTCTCA GGCAGGCTGC AGAATGGGCT GTAAGTTTTG TGCATCTACA GGGGCAGGGT TTTCTCGAAA TCTGACTCCC GGTGAGATGC TTGACCAGGT AATGACTATG CAGGAGGACT CGGGAAACAG GATTGGACAT ATAGTATTAA TGGGAATCGG TGAACCGTTG GATAATTACG AAAATGTAAT AAAGTTTTTA AAAATAGTAA ATCATCCAGA TGGACTGATG ATAGGAATGC GTAATATTTC CCTTTCAACC TGTGGTGTTG TTCCTAGAAT TTTGCAGCTT GCAAAGGAGA ATATTCCTAT AACACTCTCA GTATCGCTCC ATAGTGCCAG AGACGATAAA AGGTCCGCTA TGATGCCAGT TAATAAGACT TATTGTATTG ACAAATTAAT TTCAGCATGT AAGATATATA CTGTGAGTAC AAAAAGAAGG ATAACATTTG AATATGCAAT GATTTTAGGT GAAAATGATT CTGAGCAGGA TGCCAGAGAG TTAGCGGGAC TTTTGAAAGG GATGCTTTGT CATGTAAATT TAATTCCGGT AAATACCGTT ACAGGTAATG GTTATAAAAA AAGCTCAAGA ATTCACATAG ATAAATTTAA GAACATTTTA GAATCTAAAG GAATTGAGAC TACAGTAAGA AGGGAACTCG GCAGCGATAT AAATGCGGCC TGTGGGCAAC TTAGAAAGAA TAAAATTGAT AGTACTACCA ATTTACTTTT AAATTCTTAA
|
Protein sequence | MINLMNMTLE ELEQMLSEMG QQKFRAKQIF KWINSGIRSF SDMTNISKQL RDELEKVSKI SRLKIVDRLQ SKIDSTVKYL FELEDGNIIE SVLMEYKHGF TACISSQAGC RMGCKFCAST GAGFSRNLTP GEMLDQVMTM QEDSGNRIGH IVLMGIGEPL DNYENVIKFL KIVNHPDGLM IGMRNISLST CGVVPRILQL AKENIPITLS VSLHSARDDK RSAMMPVNKT YCIDKLISAC KIYTVSTKRR ITFEYAMILG ENDSEQDARE LAGLLKGMLC HVNLIPVNTV TGNGYKKSSR IHIDKFKNIL ESKGIETTVR RELGSDINAA CGQLRKNKID STTNLLLNS
|
| |