Gene Ccel_1532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1532 
Symbol 
ID7312245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1866755 
End bp1868104 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content37% 
IMG OID643608460 
Productsun protein 
Protein accessionYP_002505864 
Protein GI220928955 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases
[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR00446] NOL1/NOP2/sun family putative RNA methylase
[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB
[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAGTAG ATTTGGCAAG AGAAACAGCA TTAAAGATAT TATATGATAT TACTGAGAAT 
CATGCATATT CAAATATTTC AGTTAACAGG CATCTTGAGA ACGACAAGCT TAGAGAAATT
GACAGGTCAT TTGCAACGGA ACTGGTTTAT GGTACTGTGA AATGGCTTTT GCAGATTGAT
TACGTTTTAG GAAAATACTC TAGTGTTAAG CTTAAAAAGC TGTCACCATG GATAAAAAAT
ATTTTAAGAC TGGGTATATA CCAGCTTCTT CATACAGACC GTATACCAGT TTCAGCAGCA
TGTAACACAG GGGTTGAACT GGCAAAAAGA TATGGACATC AGGCCTCAAG CAGGTTCGTA
AACGCGGTTC TTAGAAATAT TGCAAAAAGT AAGAATAATA TCCCGTATCC CGATAAAAGT
GATAATGTAA ATTATTTAAG TATTTTATAC TCCCATCCCG TTTGGATGGT TGAAAAATGG
ATAGAATTAT ATGGGACAGA GTTTACAGAG GAATTACTAA AAAGTAATAA TCAGGTACCT
GATTTCATTA TCAGGACAAA TACCTTGAAA ACGGACAGGG TTACTCTGTT GGACATGCTA
CATAAAGAAG GAATAAGTGC AGAACCAGGC AGGTATATTG AAGAAGCAGT AATATTGAAA
AGCCCATCCT CTATAACAAA CCTTGAAGTA TTTAAAAATG GGTATTTCCA GGTTCAGGAT
GAGAGTTCAA TGCTAGCTGC AAAAATCCTT GACCCCAAAG AAGGTGAAAC TGTAATTGAT
GTATGCAGTG CACCGGGAGG CAAGGCAACA CATATGGCAC AGCTTATGAA TAATAAAGGT
ACTATTATCG CAAGAGATGT TTATCAGCAC AAATTAAAAC TGATAGAGCA ATCATGTTGC
AGATTGGGAA TTGATATAAT TAAAACTGAA ATTCACGATG CTTGCTGCCT TGATGAAACC
TTTACTGGGA AAGCAGACAG AGTTTTAATA GATGCACCAT GTTCAGGATT GGGAATAATA
AGAAAAAAAC CCGATATAAA GTATTCAAGA ACAGAAAAGG AACTCAGGGA AATAACAGGC
CTACAGAGGG AAATACTTAA AAATTCATCA AAATATTTAA AGCCCGGAGG GTACTTGCTG
TACAGTACAT GTACCATACA GCAAGAAGAG AATCTGGACA TTGTGAGTGA CTTTCTGGAA
GATAATCCAG ATTTCAGACT GACAGGATTT CAGGAACTTA TGCCTCCTAC TCTGGATATT
GCCAGTTCTG CCGAAGGATA TATCCAATTG TTTCCGAATA TAAATCAGAC AGATGGATTT
TTTATAAGTA AAATAAAGAG GGAGAAATAG
 
Protein sequence
MAVDLARETA LKILYDITEN HAYSNISVNR HLENDKLREI DRSFATELVY GTVKWLLQID 
YVLGKYSSVK LKKLSPWIKN ILRLGIYQLL HTDRIPVSAA CNTGVELAKR YGHQASSRFV
NAVLRNIAKS KNNIPYPDKS DNVNYLSILY SHPVWMVEKW IELYGTEFTE ELLKSNNQVP
DFIIRTNTLK TDRVTLLDML HKEGISAEPG RYIEEAVILK SPSSITNLEV FKNGYFQVQD
ESSMLAAKIL DPKEGETVID VCSAPGGKAT HMAQLMNNKG TIIARDVYQH KLKLIEQSCC
RLGIDIIKTE IHDACCLDET FTGKADRVLI DAPCSGLGII RKKPDIKYSR TEKELREITG
LQREILKNSS KYLKPGGYLL YSTCTIQQEE NLDIVSDFLE DNPDFRLTGF QELMPPTLDI
ASSAEGYIQL FPNINQTDGF FISKIKREK