Gene Ccel_1453 details

Gene Information

• Locus tag: Ccel_1453
• ID: 7310224
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium cellulolyticum H10
• Kingdom: Bacteria
• Replicon accession: NC_011898
• Strand: +
• Start bp: 1765437
• End bp: 1765979
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 643608379
• Product: protein of unknown function DUF1393
• Protein accession: YP_002505787
• Protein GI: 220928878
• COG category: [S] Function unknown
• COG ID: [COG4720] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0723727
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGATTG CCACAAAAAA ATTAGTACTT TGTGCATTAA TGACAGCAAT TGTTTTTTTA 
ATTACCTTTG CTCCGTTTCT GCAAATTCCC AGTCCTATAT CTCAGGGCTA TTACAATATT 
GGTGATACTG CTGTAATGAT AGCGGCAATC TTGCTTGGAA GAAGGTATGG CTTTGTTGCG 
GGAGCTTTTG GCTCCGCATT GGCCGATCTT GCACGCGGAT CATTTATTTT CGTACCCATA 
ACTTTCATAG TTAAAGGGAT AGAGGGTTAT ATAGTAGGTG CAATCGCCCG TGGTGGAGAA 
GAAAATCAAC CGTCAAATCT GAGGAAAATA CTGGCCGTAT CAGCAGGAGC TTTAGAAATG 
GTGGTAGGTT ATTTTATATT TGAACTAGTA GTTATAAGAA TGATTGATAA ATCATTATCT 
GTCATAGCTA TTGTTACTGA TTTGCCGGGT AATCTGATTC AGGGAGCCCT TAGTGCAGTC 
CTTGCATTGG TTTTTCTTAC TGTATTATAC AGGACAAAAG CCGTTAAAAA ATTATTACGT 
TGA 

 

Protein sequence

MRIATKKLVL CALMTAIVFL ITFAPFLQIP SPISQGYYNI GDTAVMIAAI LLGRRYGFVA 
GAFGSALADL ARGSFIFVPI TFIVKGIEGY IVGAIARGGE ENQPSNLRKI LAVSAGALEM 
VVGYFIFELV VIRMIDKSLS VIAIVTDLPG NLIQGALSAV LALVFLTVLY RTKAVKKLLR