Gene Ccel_1429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1429 
Symbol 
ID7310200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1733643 
End bp1735388 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content38% 
IMG OID643608352 
ProductABC transporter related 
Protein accessionYP_002505763 
Protein GI220928854 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATT TTAAATGGGT TTGGCAGTAT ATCAAAAAAT ATAAGCTGCG AATGTGCATT 
GCCATGATAT TTGTGTTGGT AGCGTCTGCT CTTTGCATGG TTACTCCGTA CGCCTCAGGT
ATAATAATTG ACAAGGTAAT CAGGCAAAGC CAGCATGATA TGCTTTTAAA ACTATGTATA
CTTATGTTGG CGGCAACGAT CTTAAAATCT ATAATCAGGT TTTCATATCA GATTATATTC
GAAACAATAT CACAGGGAGC TTTTATGAAA ATCAGGGAAA GTATGTACCA AAAACTCCAG
AATATGGATT TTAAGTTCTT TGATACCACC AGAACCGGTG ACATAATGGC GAGAATGACA
GGTGATTTGG ATATAGTACG CCATCTTATT TCATGGGTAA TATACATGGT TTTTGAGAAC
GCTACAGTAT TTATTTTTGC CGTAACACTG TTATTCACAA TCAATTGGCA GTTTACACTG
GTCATGCTTT TGGTAATACC TTTTCTGGCG TGGGCTGCAA TTAAGCTGGC TAGTGATGTA
AGACCGACTT TTTCTGCAAT AAGGGAACAG TTTTCAAGAC TGAATTCTGT TGTACAGGAA
AATATCAGTG GAAACCGAGT AATTAAAGCT TTTGCAACAG AATATATAGA AATAAACAAA
TTTGACAAGG AAAATGAAGC TTACCGTAAA AGAAACATGG ATTCCGCAAA GGTATGGTCT
AAATATCTCC CGATAATAGA TGCTCTGGCG GGAACTCTTT CACTTACAAT AATAATTATC
GGCGGGGTAC TTGCAATTAA CAATAAAATA ACAATCGGTG AGCTGGTAAC TTTTAATTCT
ATAGTTTGGG CATTGGGAAA TCCAATGAGG AATTCCGGCT GGCTTATAAA TGATATACAA
AGATTCAACG CATCAGCAGA CAAAATACGT GAGTATCTGA ACAATGAATC TGCAATAAGC
AATATAGAAA AGCCTGCTAA CAGGGAGATT ACAGGATTTG TTGAATTCAA TAATGTCAGC
TTCGGTTATG ATAATGAGGA AGTACTGAAA AATGTCAGTC TTAAAGCCAA GCCGGGGGAA
ACTGTAGCAA TAATAGGTCC CACAGGGTCA GGAAAATCCA CTCTTGTAAA TCTCATATGC
AGATTTTATG ATTGCAGCGA AGGAGAAGTA CTGGTTGACA ATGTAAATGT AAAGGAAATG
GATTTAAGAA CACTGCGTTC AAAGGTTTCG GTTGCAATGC AGGACGTATT TCTCTTTTCT
GATACTATTG AAGGGAATAT AGCTTATGGT GTACCTGATG CTCCCTATGA AAGCATAAAG
CGGGCTGCAG GTATAGCGGA TGCCGATGAG TTCATATCAT CCTTACCGGA AGGCTACGAT
ACTATCATAG GAGAACGCGG AGTCGGACTC TCAGGCGGAC AGAGGCAGAG AATTGCCTTG
GCGAGAGCTA TACTTAAAGA CCCGTCCATA CTAATACTGG ATGATACAAC TTCCAGTGTC
GATATGGAGA CGGAATTTGA AATACATAAA ACGCTAAGAT CTTTTTACAA TAATAAAACA
ACTTTTATAA TCGCACATAG AATATCATCT GTTAAAAATG CAGACAAGAT TATTGTTTTA
AACGATGGGC AGGTAGTAGA GCAGGGAACC CATCAGGAAC TGTTGAATTT GAAAAGCTAT
TACTACAAAG TTTATCAAAG CCAGTATGGA GATTTTGACG GACTTGATGA GAAGGAGGTG
GGCTAA
 
Protein sequence
MENFKWVWQY IKKYKLRMCI AMIFVLVASA LCMVTPYASG IIIDKVIRQS QHDMLLKLCI 
LMLAATILKS IIRFSYQIIF ETISQGAFMK IRESMYQKLQ NMDFKFFDTT RTGDIMARMT
GDLDIVRHLI SWVIYMVFEN ATVFIFAVTL LFTINWQFTL VMLLVIPFLA WAAIKLASDV
RPTFSAIREQ FSRLNSVVQE NISGNRVIKA FATEYIEINK FDKENEAYRK RNMDSAKVWS
KYLPIIDALA GTLSLTIIII GGVLAINNKI TIGELVTFNS IVWALGNPMR NSGWLINDIQ
RFNASADKIR EYLNNESAIS NIEKPANREI TGFVEFNNVS FGYDNEEVLK NVSLKAKPGE
TVAIIGPTGS GKSTLVNLIC RFYDCSEGEV LVDNVNVKEM DLRTLRSKVS VAMQDVFLFS
DTIEGNIAYG VPDAPYESIK RAAGIADADE FISSLPEGYD TIIGERGVGL SGGQRQRIAL
ARAILKDPSI LILDDTTSSV DMETEFEIHK TLRSFYNNKT TFIIAHRISS VKNADKIIVL
NDGQVVEQGT HQELLNLKSY YYKVYQSQYG DFDGLDEKEV G