| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1415 |
|---|
| Symbol | |
|---|
| ID | 7310187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 1718283 |
|---|
| End bp | 1718978 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643608337 |
|---|
| Product | LrgB family protein |
|---|
| Protein accession | YP_002505749 |
|---|
| Protein GI | 220928840 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1346] Putative effector of murein hydrolase |
|---|
| TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.429931 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAA TTATAAGGTC ACCTTTATTT GCACTGCTTA TATCTATTTT AGCTTATGAG
ATAGGTATTC TTATAAACAA AAAAACAAGG ATAGTGTTTT TCAATCCTCT AATGATTGCA
ATTGCGTTGG TTATTGGAAC TTTGTTGGCA TTACACATAC CACTGGAGGA TTATCAGAAG
GGTGGAGATT TTATAGCTCT TTTCCTGACA CCTGCAACAG TAATATTGGC GGTTCCGTTA
TATAAAAACA TAAATTCCTT AAAAAAAGAT TATATTGCCA TACTGGGTGG TGTAATAGTT
GGAGCAGCTA CGGCAATATT CAGTGTGTGG GCTATGGCAA AGGCTTTCGG ACTTTCTAAA
GAACTTATAG CATCCTTGGT ACCAAAATCT ATTACAACCC CGCTGGGGAT TGAATTATCA
ACCCAAATAA AGGGAATACC CTCTGTAACA GTTGCCGCCA TTATAATAAC TGGTGTAGTT
GGTGCCGTAT TTGCCGAATG GTTATTAAAG GTATGTAAAA TAACTGATAA GACAGCAAAG
GGTATAGCTA TAGGAACTTC ATCTCACGCG TTGGGCACTA CAAAGGCTGT TGATATAGGT
GAAACGGAAG GAGCTATGAG CGGCTTAGCC ATTGGTCTTG CAGGGCTTGT AACGGTTATA
GTTGCAACCA TTTTGTTTAA ATTCGGATTC TTTTAA
|
|---|
| Protein sequence | MKEIIRSPLF ALLISILAYE IGILINKKTR IVFFNPLMIA IALVIGTLLA LHIPLEDYQK
GGDFIALFLT PATVILAVPL YKNINSLKKD YIAILGGVIV GAATAIFSVW AMAKAFGLSK
ELIASLVPKS ITTPLGIELS TQIKGIPSVT VAAIIITGVV GAVFAEWLLK VCKITDKTAK
GIAIGTSSHA LGTTKAVDIG ETEGAMSGLA IGLAGLVTVI VATILFKFGF F
|
|---|
| |