| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1413 |
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| Symbol | |
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| ID | 7310186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 1715954 |
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| End bp | 1717936 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643608335 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_002505747 |
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| Protein GI | 220928838 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000981349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTTA TGAACAAATT TGAAGTAATT TCAGAGTACA AGCCCATGGG CGACCAACCC
AAAGCTATAG CAAAACTCAG CAAAGGCATA CTTGAAGGGC AAAAACATCA GACACTTCTG
GGAGTAACAG GTTCGGGAAA AACATATACC ATGGCGAAGG TTATAGAGCA AGTACAGAAG
CCAACACTTG TGATTGCACA TAATAAGACT CTTGCGGCAC AGCTTTGCAG TGAATTCAAG
GAATTTTTTC CAAATAATGT TGTTGAATAT TTTGTGAGTT ATTATGACTA CTATCAGCCT
GAAGCATATA TACCTTCAAC TGATACGTAT ATAGAAAAAG ATTCTTCTAT AAACGAAGAA
ATTGATAAAT TGAGACACTC TGCCACAGCT GCTTTGTTTG AAAGAAGAGA CGTAATAATT
GTTGCCAGTG TTTCCTGTAT TTATGGTTTG GGTGACCCGG AGGATTACAC CGACCTTATG
CTGTCCCTTA GAGTAGGTAT GCAGAAGGAT AGGGATGATG TAATCAAAAA GCTTGTAGAT
ATACAGTATG AAAGAAATGA GATAGATTTC AGAAGAGGAA GGTTCAGGGT CAGAGGAGAT
GTTCTGGAGA TTTTTCCTGC CAACAGTTCC GAAAAGGTTT TAAGAGTAGA ATTTTTTGGT
GATGAAATAG AAAGAATTAC GGAAGTAGAC TACCTAACTG GTGAGATAGT CGGAACCAGG
GACCATATAG CTGTATTCCC GGCTTCCCAC TATGCTACAA GCAGGCATAA AATGGACCGT
GCTATGGTAA CTATTGAAAA AGAGCTGGAA GAAAGACTGG AGCAGTTTAA AATGGAAGAC
AAGCTGCTGG AGGCTCAAAG ACTGGAGCAG AGAACCAGAT ACGACTTGGA AATGATGTCT
GAAATTGGTT TTTGTCAGGG AATAGAGAAC TACTCCCGCC ATATAAGCGG TCGTGAAGCC
GGAAGTTCCC CATATACCCT GATGGATTAT TTTCCAGATG ATTATCTCCT TGTTATTGAT
GAATCTCATG TAACAGTATC ACAGGTAGGT GCTATGTACA ACGGTGACCG ATCCAGAAAG
GAGTCACTTG TAGAATATGG TTTTAGACTG CCGTCAGCTT TTGACAACAG ACCTCTTAAA
TTCCATGAGT TTGAAGAACG GGTGAATCAG GTAGTATATG TAAGTGCAAC GCCTGCTAAT
TATGAAAGGG AACATTCTAC TCAGATAGTT GAACAGATTA TCAGGCCTAC AGGCTTAATT
GATCCCGAGA TTACAGTAAA ACCTGTAAAA GGTCAGATTG ATGATTTAAT CGGTGAAATT
AATATGAGAG CTGAAAAACA TCAAAGAGTC CTTGTAACAA CTCTTACTAA GAAGATGGCA
GAAGATTTGA CGGACTATAT GAAGGAACTT GATATAAGGG TAAAGTACCT TCATTCCGAC
GTTGTTACTT TTGAGAGAAT GGAGATAATA AGAGATTTAA GGTTGGGTGT TTTTGATGTG
CTAATCGGAA TAAATCTGTT AAGAGAAGGA CTCGACATTC CCGAGGTCTC GCTGGTAGCC
ATACTTGATG CGGATAAGGA AGGTTTTCTG CGTTCTGAAA CATCACTGAT ACAGACTATA
GGAAGAGCTG CCAGAAATTC TGAAGGTATG GTTATAATGT ATGCAGACAA CATTACAGGC
TCAATGCAGA GAGCTATAAG TGAGACAAAC AGAAGGCGTC AGATTCAGAT GGATTACAAT
GAGAAGCACG GAATTGTTCC GACTACTATT CAAAAATCCG TCAGAAATGT TCTGGAAGCC
ACGAAGGTTG CTGAAGAAGA GGACAAGTAT TATACCGAAA AGAAAGCAAC TCAAATGTCT
GAACAGGAAC TTGAAAATCT TATAGCAAAA CTGCAGAAGG AAATGAAGCA GGCGGCGGCA
GATTTACAAT TTGAGCGTGC AGCAGAATTA AGAGATAAGA TAGAATTACT CAGGGGGAAG
TAA
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| Protein sequence | MNFMNKFEVI SEYKPMGDQP KAIAKLSKGI LEGQKHQTLL GVTGSGKTYT MAKVIEQVQK
PTLVIAHNKT LAAQLCSEFK EFFPNNVVEY FVSYYDYYQP EAYIPSTDTY IEKDSSINEE
IDKLRHSATA ALFERRDVII VASVSCIYGL GDPEDYTDLM LSLRVGMQKD RDDVIKKLVD
IQYERNEIDF RRGRFRVRGD VLEIFPANSS EKVLRVEFFG DEIERITEVD YLTGEIVGTR
DHIAVFPASH YATSRHKMDR AMVTIEKELE ERLEQFKMED KLLEAQRLEQ RTRYDLEMMS
EIGFCQGIEN YSRHISGREA GSSPYTLMDY FPDDYLLVID ESHVTVSQVG AMYNGDRSRK
ESLVEYGFRL PSAFDNRPLK FHEFEERVNQ VVYVSATPAN YEREHSTQIV EQIIRPTGLI
DPEITVKPVK GQIDDLIGEI NMRAEKHQRV LVTTLTKKMA EDLTDYMKEL DIRVKYLHSD
VVTFERMEII RDLRLGVFDV LIGINLLREG LDIPEVSLVA ILDADKEGFL RSETSLIQTI
GRAARNSEGM VIMYADNITG SMQRAISETN RRRQIQMDYN EKHGIVPTTI QKSVRNVLEA
TKVAEEEDKY YTEKKATQMS EQELENLIAK LQKEMKQAAA DLQFERAAEL RDKIELLRGK
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