Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1313 |
Symbol | rplT |
ID | 7310098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1616494 |
End bp | 1616847 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643608232 |
Product | 50S ribosomal protein L20 |
Protein accession | YP_002505647 |
Protein GI | 220928738 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0292] Ribosomal protein L20 |
TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000242462 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGAG TTAAAGGTGC GGTTAGAACC CGTGCAAGAC ATAAAAAGAT ACTAAAGCTT GCAAAAGGAT ATTTTGGTGC AAAGAGCAAG TTGTTTAGAA TGGCAAACCA AGCTGTAATG AAATCCTTGA ACTATGCTTA CAACGATAGA AGAGCAAAGA AGAGAGATTT CAGAAAGCTT TGGATCGCAA GAATTAACGC TGCTGCAAGA ATAAACGGTT TAACATATAG CAGATTTATC AGCGGTTTAA GGAAATCAGG AATAGAACTT AATAGAAAAG TTCTTGCTGA TTTGGCAGTT AACGATGCAG CTGCATTTGC ACAGCTGGCA GAGACTGCTA AAGCTGCCAA ATAA
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Protein sequence | MARVKGAVRT RARHKKILKL AKGYFGAKSK LFRMANQAVM KSLNYAYNDR RAKKRDFRKL WIARINAAAR INGLTYSRFI SGLRKSGIEL NRKVLADLAV NDAAAFAQLA ETAKAAK
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