Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1300 |
Symbol | |
ID | 7310088 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1604841 |
End bp | 1605990 |
Gene Length | 1150 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643608219 |
Product | transposase IS3/IS911 family protein |
Protein accession | YP_002505634 |
Protein GI | 220928725 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.161562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA GAAGAACTTT TACCCCTGAA CAGAAAACCA AAATAGTCCT CGAAGTCTTA AAAGAGGCAC AAACATTGAC AGAGATCGCT GCTAAGTACG AAATCCAACC AAATCAGCTT ACGCGTTGGA AATCTGAGTT CATAAAGAAT GCCAACCGTG CTTTCAGTGT TGATGCTGAT GAAACCGAAC AATTGAAGCA GGCACATGAA GCTCAGATTG ACGAGCTTCA CAGGCAAATA GGTCAGTTAA CCGTAGAGCG TAACTGGCTC AAAAAAAAAT CTGAACAATT CGGCCTCCCG ACAGAGCCGC CAAAGCATGG TGGATAAAAA ACATAAAAAG CTGACCATTA CTCGGCAGTG CCAGTTGCTA GGGCTTAATC GGAGTACGCT TTACTATCAG CCGCACGAAC CGGATCGCAG CGAAGAATAC CGTGTTAAAT GGCTTATTGA TGAAATCTAT ACGAGAGACT CTTCACTTGG GTATCGGCGT ATGACGCATA TCCTTCATAG GGATCATGGC ATAAACATCA ACAAGAAGCG TACCCACCGT TATATGAGGG AAATGAACAT TTATGGAATC TGCCCAGGAC CCAACCTAAG TAAACGGGGC CGATTGAAGT ATGTCCATCC ATATCTTCTC AGAGGGCTTA CAATTGATAG GCCTAATCAG GTATGGTCAG TGGATATTAC CTGTTGTCGG ATGCCCAAAG GTCATATGTA TTTAGCAGCT ATCATCGATT GGCATTCCAA ATATATCGTC GGTTATGAAT TATCCAATAC CATGGATAAA AGTCTTGTCC TCAATCTGGT GAAAAGGACT ATCACAGCAC ATGGGAAACC CGAAATTATT AACAGTGATC AAGGATCCCA GTTTACCTGT GAAGATTATA TAAATCTTTT GAAAGAGAAC AACATAAAAG TATCAATGGA TGGAAAAGGT CAAGCCCTTG ATAATATCTG TATTGAACGC TTCTGGCGCA GTCTGAAATG GGAGAAGCTA TATCTTGAGG AATATTCCAC ACCTAAGCAA TTACGTAACA TTATTCAGGA GTATATAGCT TATTACAACA TTTACCGTCC ACATCAGACC TTAGAGTATA GGACACCAGG AGAAGTTTAT TATAGAACCC TAGCAGAAAA AACTGCCTAA
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Protein sequence | MKKRRTFTPE QKTKIVLEVL KEAQTLTEIA AKYEIQPNQL TRWKSEFIKN ANRAFSVDAD ETEQLKQAHE AQIDELHRQI GQLTVERNWL KKKLNNSASR QSRQSMVDKK HKKLTITRQC QLLGLNRSTL YYQPHEPDRS EEYRVKWLID EIYTRDSSLG YRRMTHILHR DHGININKKR THRYMREMNI YGICPGPNLS KRGRLKYVHP YLLRGLTIDR PNQVWSVDIT CCRMPKGHMY LAAIIDWHSK YIVGYELSNT MDKSLVLNLV KRTITAHGKP EIINSDQGSQ FTCEDYINLL KENNIKVSMD GKGQALDNIC IERFWRSLKW EKLYLEEYST PKQLRNIIQE YIAYYNIYRP HQTLEYRTPG EVYYRTLAEK TA
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