| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1280 |
|---|
| Symbol | |
|---|
| ID | 7310071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 1584278 |
|---|
| End bp | 1585582 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643608201 |
|---|
| Product | glutamate-1-semialdehyde-2,1-aminomutase |
|---|
| Protein accession | YP_002505616 |
|---|
| Protein GI | 220928707 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
|---|
| TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.542445 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATATCTA GTAATGGTTT GTTTGATAGA GCAAAAAAAG TCATTCCGGG TGGTGTAAAC
AGTCCCGTAA GAGCATTTCG AGCAGTGGAC TTAAATCCTT TATTTATAAG TCGTGCAAAA
GGCTCAAAGC TTTATGATGT GGAAGAGAGA GAGTATATTG ACTATGTCTG TTCATGGGGC
CCTATGATTT TAGGCCACAG CAATGACCTT ATACTGAAAA ATGTTGAAAA TGTATTGCAT
AACGGACTTA GCTTTGGAGC ACCTGTTGAA ACTGAGGTAC AAATAGCAGA GATGATAGTC
TCCATGGTAC CGGGAGTTGA AATGGTCAGA ATGGTGAACA GCGGAACAGA AGCGGTTATG
AGTGCTATCC GGCTGGCGAG AGGCTTTACA AAACGGGACA AGATTATAAA GTTCGAGGGC
TGCTACCATG GGCACAGTGA CAGTATGCTT GTAAAGGCAG GCTCAGGTGT ACTGACTGCC
GGAATCCCTG ACAGTCTGGG AGTACCACAG AACGCAGCGG GAGATACATT AACTGCTGTT
TACAATAATA TTTCCAGTGT TGAACAGTTA TTTCAGGAAA ATAAGAATCA TATAGCAGCT
GTAATTATAG AGCCTGTTGC AGCAAATATG GGAGTCATTC CTCCGCAAGA AGGTTTTTTG
AAGGAATTGT CCGGTATTTG CCGTCAAAAT TCCGCATTGC TTATTTTTGA CGAGGTTATT
ACAGGTTTTC GCCTTGCAGC AGGGGGAGCA CAGGAGTATT TTGGAGTTGA AGCTGATATT
GTTACCTTCG GTAAAATAAT AGGCGGTGGT ATGCCGGTGG GAGCCTACGC AGGAAGAAAA
GAAATAATGG AACATGTAGC TCCTTGCGGA GGTGTTTATC AGGCAGGAAC CCTTTCAGGC
AATCCCGTTG CAATGGCAGC AGGACTTGCA CAGCTTGAGA TTTTGAAAAG CAAGCCTGAA
ATATATGAAG ACATTAATAA AAAGGCTGAA TTTTTAGGAA ATGGATTTGA AAAAATAGTA
CAGAAATACA AGGCTCCAAT AACATTGAAC AGAGTTGGTT CTTTGCTTTG TGGGTTTTTC
TCACAAAACC CGGTTACCAA CTATCAGGAG GCTAAACTAA GCAATACCAA CTATTACGCC
GCTTATTTCA AGAGTATGCT AAACAAAGGA ATTTATCTTG CACCGTCACA GTTTGAGGCA
ATGTTTGTAA GCTCCGCACA TACTTATGAG GATATTGACG CTACATTGAA AGCGGCAGAA
GAAACCTTAG TTGAAAATAT TTCTTTAATG GAGGAACTAA TATGA
|
|---|
| Protein sequence | MISSNGLFDR AKKVIPGGVN SPVRAFRAVD LNPLFISRAK GSKLYDVEER EYIDYVCSWG
PMILGHSNDL ILKNVENVLH NGLSFGAPVE TEVQIAEMIV SMVPGVEMVR MVNSGTEAVM
SAIRLARGFT KRDKIIKFEG CYHGHSDSML VKAGSGVLTA GIPDSLGVPQ NAAGDTLTAV
YNNISSVEQL FQENKNHIAA VIIEPVAANM GVIPPQEGFL KELSGICRQN SALLIFDEVI
TGFRLAAGGA QEYFGVEADI VTFGKIIGGG MPVGAYAGRK EIMEHVAPCG GVYQAGTLSG
NPVAMAAGLA QLEILKSKPE IYEDINKKAE FLGNGFEKIV QKYKAPITLN RVGSLLCGFF
SQNPVTNYQE AKLSNTNYYA AYFKSMLNKG IYLAPSQFEA MFVSSAHTYE DIDATLKAAE
ETLVENISLM EELI
|
|---|
| |