Gene Ccel_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1278 
Symbol 
ID7312206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1581797 
End bp1583311 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content40% 
IMG OID643608199 
Producturoporphyrin-III C-methyltransferase 
Protein accessionYP_002505614 
Protein GI220928705 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0007] Uroporphyrinogen-III methylase
[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID[TIGR01469] uroporphyrin-III C-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000100069 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACATG GATTTGTGGC ATTAGTTGGC GCAGGGCCGG GAGATAAGGG GCTTATTACC 
TTAAGAGGAG CAGAACTTCT CTCTAAGGCT GATGTGGTAG TGTATGACAG ACTGGTATCC
CATGAAATTA TAAAAATGAT ACCGCCTGAG GTGGAAAAAA TAGATGTAGG AAAAGAGAAT
AAATTCCACC TTGTTAAACA GGAAGATATT AACCGGATAC TCCTAAACAA GTCACTGGAA
GGAAAAAATG TTATAAGGCT TAAAGGAGGA GACCCTTTTG TATTTGGGAG GGGAGGAGAA
GAACTTGAGC TTTTACAGGA AAATGATATT CCCTTTGAGG TTGTTCCCGG AGTAACTTCA
GCTGTGGCAG CACTGTGCTA TGGAGGGATA CCGGCTACCC ACAGGGATTT TTGCTCTTCA
ATGCATATTA TTACCGGACA TGCCAGAGAG GGAGGACAGC TTTCAATTCC ATTTAATGAA
TTAAAGGAAT TGAACGGAAC ACTGGTTTTC CTCATGGGAT TATCTTCACT GGCATATCTG
ATGAAGGGGC TTTTAAATGC AGGTATGGAT AAGGACATGC CCGCTGCAAT AATAGAGAAC
GGTACAAGGC CTAACCAGAG AAAACTGGTA GCCACTGTGG GTACACTGGA GCAAAAGGCT
TTGGAGATGG GAATAAAATC TCCTGCCATT ATTGCTGTAG GTAAGGTTTG CACTCTCTCT
GACAAATTCA ACTGGTTCAT GAAAAAGCCT CTCTTCGGTA CAAAAGTACT CGTTACAAGA
CCTAAGGCGT CTTCCAGTAC AATTGTGGAG AAGCTTCGCC AACTGGGTGC GGAGCCTTTA
GAGTATCCCT GTATTGAGGT GGTACCAATA CCTCAGAATG AAAAGCTTTG CAGTGTATGT
GAAAAGCTAA GTGAATATGG CTGGATTTTA TTTACCAGTA AAAACGGTAT ACAGATATTT
TTTGATTACT TAAATTCCCA AGGGCTGGAT GCCAGAGTTC TTGCAAATAT AAAAATCGGT
ACGGTTGGAA GTCAGACAGC GAGAGCTTTA AAGGAAGTAG GGCTGATTTC GGATTTTACT
CCTGAAATCT TTGACGGCAG CCATCTTGCA CAGGGCGTTT CACAGCTTGT AGGAGAAAAT
GAAAAGGTTC TTATTTGTGA TGCGGCAATA GCAAGTGACG ACATTGTTAA TATTTTCAAT
AACAATAATA TAAAATTTGA CCGGGTTCCC TTGTACCATA CAAATTATAT AAATGAGAAC
AGTGATGAAA TCAGAAAAAT GATTATTGAT GGTGAACTGA AATACATAAC TTTTACAAGT
GCATCCACTG TAGAGGGCTT TATGGCATCT GTAAAAGATA TTCCTCTGGG AAGTCTGACG
GCTGTTTGTA TAGGAAATCA GACGGCGCAA GCTGCTAAAA AGTATAACCT GACATATGTA
ATATCTGAAA AATCTACAAT TGATTCAATA ACAGACAAGC TATTGGAAAT AGGAGGCGGT
AATATTGATG ATTAA
 
Protein sequence
MKHGFVALVG AGPGDKGLIT LRGAELLSKA DVVVYDRLVS HEIIKMIPPE VEKIDVGKEN 
KFHLVKQEDI NRILLNKSLE GKNVIRLKGG DPFVFGRGGE ELELLQENDI PFEVVPGVTS
AVAALCYGGI PATHRDFCSS MHIITGHARE GGQLSIPFNE LKELNGTLVF LMGLSSLAYL
MKGLLNAGMD KDMPAAIIEN GTRPNQRKLV ATVGTLEQKA LEMGIKSPAI IAVGKVCTLS
DKFNWFMKKP LFGTKVLVTR PKASSSTIVE KLRQLGAEPL EYPCIEVVPI PQNEKLCSVC
EKLSEYGWIL FTSKNGIQIF FDYLNSQGLD ARVLANIKIG TVGSQTARAL KEVGLISDFT
PEIFDGSHLA QGVSQLVGEN EKVLICDAAI ASDDIVNIFN NNNIKFDRVP LYHTNYINEN
SDEIRKMIID GELKYITFTS ASTVEGFMAS VKDIPLGSLT AVCIGNQTAQ AAKKYNLTYV
ISEKSTIDSI TDKLLEIGGG NIDD