| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1254 |
|---|
| Symbol | |
|---|
| ID | 7310048 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 1555289 |
|---|
| End bp | 1556173 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643608175 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002505590 |
|---|
| Protein GI | 220928681 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.576664 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCATA GAAAACTTAA GAAAGTCAGT GTATTTACAA TAGTAAATAA CAGTTTTCTA
ATATTTGCAG CATTACTTTG TATTATACCG CTTGTGCATA TATTGGCAGT ATCATTCAGC
TCCAGCTCCG CAGCCGCAGC AGGTAAGGTT GTATTCTGGC CTGTTGAGTT TACATTAAAT
TCATATAACT ATGTTGCAAA AAGGGTTGCT TTTTGGCATT CAATGTTGGT TTCAGTTGAA
AGAATCGCAC TGGGTGGATT TATTAACCTG GTACTTACTA TATTATGTGC GTATCCCTTA
TCAAAGGAAA AGACGGAGTT TCGTTTCCGT ACATTTTACG CATGGGCATT TTTTATAACA
ATGTTGTTTA ACGGAGGCTT GATTCCATGG TATATTGTAA TCAAGCAGAT GGGATTACTT
GATAGTATAT GGGCTTTGGT TCTTCCAGGT GCAGTTCCGG TTTTCAGTGT AATACTATTA
CTAAATTTTT TCAGGGAAAT ACCGAAGGAA TTAAGTGAAG CAGCTTACAT TGACGGAGCA
GGCCACTGGA CTACACTCTG GAGAATAATG GTACCTGTAT CTACCCCAGC TTTGGCAACA
ATAACTCTGT TCTCATTGGT AGGTCACTGG AACAGCTGGT TTGACGGTCT GATATTAATG
AATAAGGCGG AAAATTACCC TCTTCAAAGC TATATACAGA CTATTGTAGT GCAGAGATCC
TACAGTATGC TTTCAAGACA GGAAATTTCC GAACTGGCAA CTATTTCAGA CAGGACATTA
AGAGCTTCTC AGATTTTCCT GGGAACCTTG CCTATAGTTA TGGTATATCC TTTCCTACAG
AAATATTTTG TAAAGGGAAT AGTTCTCGGT GGTGTAAAAG GATAA
|
|---|
| Protein sequence | MKHRKLKKVS VFTIVNNSFL IFAALLCIIP LVHILAVSFS SSSAAAAGKV VFWPVEFTLN
SYNYVAKRVA FWHSMLVSVE RIALGGFINL VLTILCAYPL SKEKTEFRFR TFYAWAFFIT
MLFNGGLIPW YIVIKQMGLL DSIWALVLPG AVPVFSVILL LNFFREIPKE LSEAAYIDGA
GHWTTLWRIM VPVSTPALAT ITLFSLVGHW NSWFDGLILM NKAENYPLQS YIQTIVVQRS
YSMLSRQEIS ELATISDRTL RASQIFLGTL PIVMVYPFLQ KYFVKGIVLG GVKG
|
|---|
| |