Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1224 |
Symbol | |
ID | 7310021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1498348 |
End bp | 1499880 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643608145 |
Product | ABC transporter related |
Protein accession | YP_002505560 |
Protein GI | 220928651 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGAATG GAAATCGTGA AGTTCTTAAA ATGAAAAATA TTTGCAAGAC TTTTCCGGGA GTTACAGCAT TATCAAATGT GGATTTTACA TTGCGTTCAG GTGAGATTCA TGCTCTGATG GGTGAGAATG GTGCCGGGAA AAGTACCTTG ATAAAAGTTT TAACGGGTGT TGAAGAGTTT GAATCAGGTC AAATAATTAT AGATGGATTA AATTATCCTG TTATAAATAA ATCTCCTCAG GAAGCCCAAG TAAATGGAAT AAGTACAGTA TACCAGGAGA TAAATTTATG TCCGAATCTT TCTGTAGCCG AGAATATTTT TATAGGAAGA GAGCTTAAAA AGGCAGGACG TATTGATTGG AAGGCAATAA ATAAAAGAGC AAAAGAGATT TTATTGAATT TCAATATGGA TATTGATGTT ACAAAATCTT TGGACAATTA TTCGGTGGCT ATGCAGCAGA TGGTTGCAAT TGCCAGAGCA ATTGACATTT CCTCTAAAGT ACTTATATTG GATGAACCCA CATCTAGCTT AGATGAAAAT GAGGTTGAAA AGCTGTTTGA GGTAATGAGA AAATTAAAAT CTCAGGGAAC AGGTATTGTA TTTGTAACCC ACTTTCTTGA ACAGGTATAT GCAGTATGTG ACAGGATTAC TGTATTGAGA AACGGTAGTT TGGTAGGCGA ATATGAGGTT GAAAAGCTGC CAAGAGTTCA ATTGGTTGCT AAAATGATGG GTAAGGAATT TGATGATTTA GCCCTTATAA AAAAAGCAGC AAAAGAACAA GAAATAAAAG AAACAAAAGA AACCATTATT TGTGCAAAAG AATTGGGACA TACCGGGACT ATCAAACCAT TTAATCTGGA AATAAGAAAA GGCGAAGTAA TAGGTCTTGC AGGCCTTTTA GGCTCTGGCC GCTCCGAGCT GGCAAGAGTA ATATACGGTG CTGATAAGGC AGATTGCGGA GAACTTGAAG TTAACGGACA AGAACGCAGC TTTAAATCAC CTATAGATTC AATGAAAGCA GGAATGGCTT TTTGTCCTGA AAACAGGAAG GAAGAAGGAA TTATAGCCGA TTTATCTGTA AGAGAAAATA TGATTCTTGC TCTCCAAGCA AAGAGAGGTA TGTTTAAGCT GATAAGTAAA AAGGAACAGG AGGAGCTGAC AGACAAATTT ATTAACATGC TTCAGATTAA AACAGCGGAT CGTGAAACTC CCATAAAGCA GCTCAGCGGC GGTAACCAGC AAAAGGTAAT ACTTGGCAGA TGGCTTATGA CTGAACCAGA TTTTTTGATT CTTGACGAAC CCACCAGAGG TATTGATGTA GGTACCAAAA CAGAGATACA GAAGCTTGTT GTTGACTTTG CGGGCAAAGG AATGACAGTG ATGTTTATTT CTTCGGAAAT AGAGGAGATG CTGCGTACAG TTAATAGAAT GGCAGTTCTC CGCGATGGTA AAAAAGTAGG GGAGCTTGAC GAAAATGAGC TGTCTCAGGA ATTGGTTATG AAGGTTATCG CAGGGGGTGA TGCTAATGTA TAG
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Protein sequence | MENGNREVLK MKNICKTFPG VTALSNVDFT LRSGEIHALM GENGAGKSTL IKVLTGVEEF ESGQIIIDGL NYPVINKSPQ EAQVNGISTV YQEINLCPNL SVAENIFIGR ELKKAGRIDW KAINKRAKEI LLNFNMDIDV TKSLDNYSVA MQQMVAIARA IDISSKVLIL DEPTSSLDEN EVEKLFEVMR KLKSQGTGIV FVTHFLEQVY AVCDRITVLR NGSLVGEYEV EKLPRVQLVA KMMGKEFDDL ALIKKAAKEQ EIKETKETII CAKELGHTGT IKPFNLEIRK GEVIGLAGLL GSGRSELARV IYGADKADCG ELEVNGQERS FKSPIDSMKA GMAFCPENRK EEGIIADLSV RENMILALQA KRGMFKLISK KEQEELTDKF INMLQIKTAD RETPIKQLSG GNQQKVILGR WLMTEPDFLI LDEPTRGIDV GTKTEIQKLV VDFAGKGMTV MFISSEIEEM LRTVNRMAVL RDGKKVGELD ENELSQELVM KVIAGGDANV
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