Gene Ccel_1138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1138 
Symbol 
ID7309948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1399587 
End bp1401146 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content37% 
IMG OID643608060 
Producttwo component transcriptional regulator, AraC family 
Protein accessionYP_002505475 
Protein GI220928566 
COG category[T] Signal transduction mechanisms 
COG ID[COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTACAAAG TGTTGATTGT AGATGACGAA AGCATAATTC GCAATGGTCT TTACAATATG 
ATACCATGGT CAGATTTAGG AGTAAGCGGT GTTCTGACAG CATCGTGTGC AAAGGAAGCC
CTGAAAATAG CCCAGAATAC CGAGCTGGAT ATAATGCTTA CGGATATTTG TATGCCTGAA
ATGGACGGGC TTGAAATGAC CAAAATTATG CTTGAGATTA TACCTGATTT GAAAGTAATA
GTGCTGACAG GCTATGATGA CTTCAAATAT GCTCAGAAAA GCTGTTCACT TGGGGTTAAA
GACTTTATAC TTAAGCCTGT TGATGAAGGA AGCCTGATTA AATGTATAAA ATTGCAAATA
GACCATATTC AATCGGAACT ACAAACCGAA GTTGAAAACA ATATTATGAG CCGTAAACGT
ATGCTTGAAA ACCAGAGGGA GTTTGAAAAG TCGCTGATGA AGCTCACTGA AAAATCACTT
GATCAGCCGG ATGTTATAGA AGTACCGCAG TGTATAAAGT TTGCCGATGA CTGTGAATAT
CAGGTTGCAG TATTGACTCC TGAAATATCT GAAAACAGTA TTTGGAATCA GCACAGGAAC
TTGCTTATAA TGTCTATAAA GAGCTTTTTT ATTGATTTAG TGGATGCACA GAATTCAGGC
TGGACTTTTC AGAATTCTGA CGGTGATATA GTCGTTATTT TTTATGTAGA TAAGAAATCG
GAAAATGCTG AAGAGCAAAT TTCAAAATTG CAGGAAATTA TTGATGTGGA ATTTGACGTA
GAAATGCGGA TGGGAATAGG TCCCGTTGTT CAAAATATGT CTAGGATAAA AAATTCATAT
GAAATTGCAA GAAAAAAATT CGGTGTAAAA AAGCCACCTC ATGACACCGA CAATAATAAG
CATGTGGATG ATTATTTAAA TAAAAAGGAT AAGCTTTTAA TTCTGAAAGA AAAGATACTT
GCCAGCTTCC ATGATACTGA AGCTGCAAAG GAATATCTGA AGAAATACAT AAACGAGGTT
AAAACGTCCG GAGTTTCAAA ATCCGTAGCC GAACAAAAGT TTTACGATCT TGCATCGGCT
TTCTATTGGG AATATCTTAA AACCACAGGA AATTCTGCGG ACGGTAGACT GGAAACACTG
ATTTCAACTC TTCAAACCAA CGATTTAGAG AATTGCTGTG TATTTACCGA AATGTTTATT
GTAAAACTCA TGTATACCAA CAAGAAGCAA ATGCATGAGA TAATTGAAGC GGCGACTGTA
TTTATCAATA AAAGACTTAC GGAAGATCTG ACAGTTTTTA CTTTGGCAGA ACAGTTTCAT
GTTGCAAGAA ATTATTTTTC CAGACTTTTT AAAAAGGAGA TGGGAGAGGG CTGCAACGAA
TATATAACCC GTAAACGTAT CGAAAAAGCA AAGCATCTTC TCACTGTGTC AAGGCTTAAA
ACATATGAAG TTGCAGAACA AGTAGGGTAC AATGATACAA ATTATTTTTC ACTGGCATTT
AAAAAGAATA CAGGCATGTC TCCCACAGAA TTCAGGGACA GACAGAACAA CCCGGAGTAA
 
Protein sequence
MYKVLIVDDE SIIRNGLYNM IPWSDLGVSG VLTASCAKEA LKIAQNTELD IMLTDICMPE 
MDGLEMTKIM LEIIPDLKVI VLTGYDDFKY AQKSCSLGVK DFILKPVDEG SLIKCIKLQI
DHIQSELQTE VENNIMSRKR MLENQREFEK SLMKLTEKSL DQPDVIEVPQ CIKFADDCEY
QVAVLTPEIS ENSIWNQHRN LLIMSIKSFF IDLVDAQNSG WTFQNSDGDI VVIFYVDKKS
ENAEEQISKL QEIIDVEFDV EMRMGIGPVV QNMSRIKNSY EIARKKFGVK KPPHDTDNNK
HVDDYLNKKD KLLILKEKIL ASFHDTEAAK EYLKKYINEV KTSGVSKSVA EQKFYDLASA
FYWEYLKTTG NSADGRLETL ISTLQTNDLE NCCVFTEMFI VKLMYTNKKQ MHEIIEAATV
FINKRLTEDL TVFTLAEQFH VARNYFSRLF KKEMGEGCNE YITRKRIEKA KHLLTVSRLK
TYEVAEQVGY NDTNYFSLAF KKNTGMSPTE FRDRQNNPE