Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1138 |
Symbol | |
ID | 7309948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1399587 |
End bp | 1401146 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643608060 |
Product | two component transcriptional regulator, AraC family |
Protein accession | YP_002505475 |
Protein GI | 220928566 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTACAAAG TGTTGATTGT AGATGACGAA AGCATAATTC GCAATGGTCT TTACAATATG ATACCATGGT CAGATTTAGG AGTAAGCGGT GTTCTGACAG CATCGTGTGC AAAGGAAGCC CTGAAAATAG CCCAGAATAC CGAGCTGGAT ATAATGCTTA CGGATATTTG TATGCCTGAA ATGGACGGGC TTGAAATGAC CAAAATTATG CTTGAGATTA TACCTGATTT GAAAGTAATA GTGCTGACAG GCTATGATGA CTTCAAATAT GCTCAGAAAA GCTGTTCACT TGGGGTTAAA GACTTTATAC TTAAGCCTGT TGATGAAGGA AGCCTGATTA AATGTATAAA ATTGCAAATA GACCATATTC AATCGGAACT ACAAACCGAA GTTGAAAACA ATATTATGAG CCGTAAACGT ATGCTTGAAA ACCAGAGGGA GTTTGAAAAG TCGCTGATGA AGCTCACTGA AAAATCACTT GATCAGCCGG ATGTTATAGA AGTACCGCAG TGTATAAAGT TTGCCGATGA CTGTGAATAT CAGGTTGCAG TATTGACTCC TGAAATATCT GAAAACAGTA TTTGGAATCA GCACAGGAAC TTGCTTATAA TGTCTATAAA GAGCTTTTTT ATTGATTTAG TGGATGCACA GAATTCAGGC TGGACTTTTC AGAATTCTGA CGGTGATATA GTCGTTATTT TTTATGTAGA TAAGAAATCG GAAAATGCTG AAGAGCAAAT TTCAAAATTG CAGGAAATTA TTGATGTGGA ATTTGACGTA GAAATGCGGA TGGGAATAGG TCCCGTTGTT CAAAATATGT CTAGGATAAA AAATTCATAT GAAATTGCAA GAAAAAAATT CGGTGTAAAA AAGCCACCTC ATGACACCGA CAATAATAAG CATGTGGATG ATTATTTAAA TAAAAAGGAT AAGCTTTTAA TTCTGAAAGA AAAGATACTT GCCAGCTTCC ATGATACTGA AGCTGCAAAG GAATATCTGA AGAAATACAT AAACGAGGTT AAAACGTCCG GAGTTTCAAA ATCCGTAGCC GAACAAAAGT TTTACGATCT TGCATCGGCT TTCTATTGGG AATATCTTAA AACCACAGGA AATTCTGCGG ACGGTAGACT GGAAACACTG ATTTCAACTC TTCAAACCAA CGATTTAGAG AATTGCTGTG TATTTACCGA AATGTTTATT GTAAAACTCA TGTATACCAA CAAGAAGCAA ATGCATGAGA TAATTGAAGC GGCGACTGTA TTTATCAATA AAAGACTTAC GGAAGATCTG ACAGTTTTTA CTTTGGCAGA ACAGTTTCAT GTTGCAAGAA ATTATTTTTC CAGACTTTTT AAAAAGGAGA TGGGAGAGGG CTGCAACGAA TATATAACCC GTAAACGTAT CGAAAAAGCA AAGCATCTTC TCACTGTGTC AAGGCTTAAA ACATATGAAG TTGCAGAACA AGTAGGGTAC AATGATACAA ATTATTTTTC ACTGGCATTT AAAAAGAATA CAGGCATGTC TCCCACAGAA TTCAGGGACA GACAGAACAA CCCGGAGTAA
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Protein sequence | MYKVLIVDDE SIIRNGLYNM IPWSDLGVSG VLTASCAKEA LKIAQNTELD IMLTDICMPE MDGLEMTKIM LEIIPDLKVI VLTGYDDFKY AQKSCSLGVK DFILKPVDEG SLIKCIKLQI DHIQSELQTE VENNIMSRKR MLENQREFEK SLMKLTEKSL DQPDVIEVPQ CIKFADDCEY QVAVLTPEIS ENSIWNQHRN LLIMSIKSFF IDLVDAQNSG WTFQNSDGDI VVIFYVDKKS ENAEEQISKL QEIIDVEFDV EMRMGIGPVV QNMSRIKNSY EIARKKFGVK KPPHDTDNNK HVDDYLNKKD KLLILKEKIL ASFHDTEAAK EYLKKYINEV KTSGVSKSVA EQKFYDLASA FYWEYLKTTG NSADGRLETL ISTLQTNDLE NCCVFTEMFI VKLMYTNKKQ MHEIIEAATV FINKRLTEDL TVFTLAEQFH VARNYFSRLF KKEMGEGCNE YITRKRIEKA KHLLTVSRLK TYEVAEQVGY NDTNYFSLAF KKNTGMSPTE FRDRQNNPE
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