Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1106 |
Symbol | |
ID | 7309919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1363980 |
End bp | 1365086 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643608030 |
Product | Tail Collar domain protein |
Protein accession | YP_002505445 |
Protein GI | 220928536 |
COG category | [S] Function unknown |
COG ID | [COG4675] Microcystin-dependent protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTTAA AATTTCCCGT AGGTATGGTC ATACCTTTTG CCGGACCCCT TAAAGAGGAC CAGTTAAAAT CATCCGGTTG GGTTCCTTGT GACGGAAGGG TGTTGGATAA AACACAGTAT TCAGAGCTTT TTGATGTAAT CGGAACTAAA TATGGCGGAG ATGGTATTCC GAATTTCAAT ATACCGGATC TTCGAGGCAG ATTTGTACGT GCCACCGATC ATGGAAGAGG ATATGATCCT GATGCTCAAC GGCGTAAAGC GTCAAAATCA GGTGGAGCCG CAGGAGACAA TACAGGCTCG GTACAGGAGT ATGCAACAGC AAAACCGAAG AATAATTTTA TAACAAACGA TAAGGGTAAT CATAACCACT TGGTAGACCA TCTACCGACA GACTATTGGA ATGCTGCGTG TGCAATAACT AGTAATGAAG GTGCTAATTT CCCCGGCCGT ACGGCAACAT CAGGGGAAGC AGGACAACAT TCACATACCA TCGTATCCGG AGGAGATAGT GAATCAAGAC CTGTAAACCT ATATATGTAC TGGATTATAA AATTTACTTC CAGTGACTAC GATGAATCCA TTTTATTACC GGCTGGTTCA ATTGTTTCGT TTGCAGGTGA TTCTGTAAAG AAGAGCAATG AGCTAATTGC TAACGGCTGG CTGCCTTGTA TAGGCAGTTC ATATGAAGCA AACAAATATC CTGATCTTTA CGAGAATATT TCCAATATAT ACGGAGGAGA CCAGAACAAA TTTAATGTAC CCGACCTTCG AGGTTTATTT ATAAGAGGTG TTAATTCAAA TACTTCAGAA ACACCCGGGG TTCATGGAGC TACCAGAGTT GGTCAAACAG AGGACTATTC AACTGCTCTT CCAAAGACTT TAAATTTCAC ATTGTCAACA GATGGAGCTC ATACCCATAG TGCCCCAAAA CTGCCACAGG ACAAATACAT AGAAAATTAT TGTGCAGGTC ATGAAGTTGC CAACTTTCCA TCTAATCAAT ATACCGGCAA TAACGGCAAT CATGCTCATA CAATCGCCGG CGGTGATGCT GAAACCCGTC CTGTAAATAT TTATCTGGAT TATATTATAA AATCCAGTAA TGTTTAA
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Protein sequence | MPLKFPVGMV IPFAGPLKED QLKSSGWVPC DGRVLDKTQY SELFDVIGTK YGGDGIPNFN IPDLRGRFVR ATDHGRGYDP DAQRRKASKS GGAAGDNTGS VQEYATAKPK NNFITNDKGN HNHLVDHLPT DYWNAACAIT SNEGANFPGR TATSGEAGQH SHTIVSGGDS ESRPVNLYMY WIIKFTSSDY DESILLPAGS IVSFAGDSVK KSNELIANGW LPCIGSSYEA NKYPDLYENI SNIYGGDQNK FNVPDLRGLF IRGVNSNTSE TPGVHGATRV GQTEDYSTAL PKTLNFTLST DGAHTHSAPK LPQDKYIENY CAGHEVANFP SNQYTGNNGN HAHTIAGGDA ETRPVNIYLD YIIKSSNV
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