Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1105 |
Symbol | |
ID | 7309918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1363354 |
End bp | 1363956 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643608029 |
Product | Tail Collar domain protein |
Protein accession | YP_002505444 |
Protein GI | 220928535 |
COG category | [S] Function unknown |
COG ID | [COG4675] Microcystin-dependent protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAAGTA CGGAGAGAAT GCCCATAGGA AGTGTCATTT CATTTGCAGG AGAAATTAAA TCTGAGATGG TTAACAGATT GTATAGAATG GGGTGGCTTA TATGTGACGG CAGCAAATTG AAAATAGCTG AATATCCTGA TCTCTTTCAG GCTATCGGAA AAGCTCATGG AGGAGATAAT ACATATTTTT ACCTGCCTGA TACGCAGAGC AAATTTATCA GAGGAGTAAA TGGAGACTCA GTCGGCGAAT CGGGCAGGCT CATGGATCCT GACGTAGCTA AAAGGACATT TGCAAAACCG GGAGGGAATA CAGGAAATAA TGTGGGTTCA TATCAGGATT TTGCAACAGG GCTTCCTAAG GTTAGCCTTA CTACTGACTT TATAGGCAGT CATACACACA GTTTACCCCA CTTGCCCGAT GGCTCCCACA ATGCCTATGC CGGCAGTATA GGCAGGGACG GAGGAAAAGA AGCCGGTGAC AATACCAGGA CAGGCGAATC AGGTTCCCAT TCTCACGAAA TCATCGGCGG AGGAGATCCG GAAACACGTC CTAGAAATAT GAATCTTCAT TTCATAATTA AATTCAGCAA AGACAGTAAA TAA
|
Protein sequence | MASTERMPIG SVISFAGEIK SEMVNRLYRM GWLICDGSKL KIAEYPDLFQ AIGKAHGGDN TYFYLPDTQS KFIRGVNGDS VGESGRLMDP DVAKRTFAKP GGNTGNNVGS YQDFATGLPK VSLTTDFIGS HTHSLPHLPD GSHNAYAGSI GRDGGKEAGD NTRTGESGSH SHEIIGGGDP ETRPRNMNLH FIIKFSKDSK
|
| |