| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1079 |
|---|
| Symbol | |
|---|
| ID | 7309894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 1334033 |
|---|
| End bp | 1334602 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643608003 |
|---|
| Product | isochorismatase hydrolase |
|---|
| Protein accession | YP_002505418 |
|---|
| Protein GI | 220928509 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAATAACA CGGCACTTAT TATTGTAGAC ATGGTAAAGG ATTTTACAGA CCCCGAGGGG
CTGGTGTTCT ATCCTCAAAA TCTCGAAATA TTGCCTAGGA TAAAACAGGT TCTTGATGAA
TGTAGGAAAC ATAATATGCT TGTTATCTTT CTAAGGCACA GCAACAGAAA GGACAAATTT
GATAAAAACC TGGTTAACAT GCGTCCAAAC TGTATTGAAG GCACCGGGGG AGATGAAATA
GACCCAATGC TTACGGTTGA CCCGGTAAAG GATTATGTAA TTAAAAAAAG ACGCTACAGC
GGTTTTGTGG GCACTGATCT TGACATGGTA TTAAGAGAAA ATAAAATTCA AAACGTCATA
TTAGTAGGTA CCAAAACCAA TTGCTGTATA CGGGCCACAG TCACAGATGC ATATTACCTG
GATTATACAC CTATAGTGGT ATCTGACTGT GTGGCAACCA ATGACGAGAC GGTAAATCAG
GTCCATTTGA CGGACATAAA GAAATATTTG GGCAAGGTAA TTACTTCACA GGAGCTTTTC
GATCTCCTGG ATAAAGGGGA GATGGTCTGA
|
|---|
| Protein sequence | MNNTALIIVD MVKDFTDPEG LVFYPQNLEI LPRIKQVLDE CRKHNMLVIF LRHSNRKDKF
DKNLVNMRPN CIEGTGGDEI DPMLTVDPVK DYVIKKRRYS GFVGTDLDMV LRENKIQNVI
LVGTKTNCCI RATVTDAYYL DYTPIVVSDC VATNDETVNQ VHLTDIKKYL GKVITSQELF
DLLDKGEMV
|
|---|
| |