| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1076 |
|---|
| Symbol | |
|---|
| ID | 7309891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 1330469 |
|---|
| End bp | 1332016 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643608000 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002505415 |
|---|
| Protein GI | 220928506 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0403178 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATGCAA TAGAAGCTGT TAATTTAACA AAAAAATATG GCGATTTTGT TGCTAACGAC
AATATAAACC TTTCTATCGG CAAAGGTGAA ATTACCGCAA TAGTCGGAGA AAATGGGGCA
GGAAAAACAA CTCTTATGAA CATGTTTTTC GGACTACAGC GTCCCACAAG CGGCGAATTG
CTTGTTAATG GAAAAAAGGT TTCATTTGGT TCTTCATTAG ACGCCATTAA TTGCGGCCTG
GGTATGGTGC ATCAGCATTT TAAGCTGGTG CCCAGCCTGA CTGTTTTTGA AAACATACTA
CTTGGAGTCG AAATAAGCAG AAAAATAAAT TTTTCTCAAA AACTTAAATT GGGGACTCCA
ATAATAGATA AGAAATGTGA AAAGAAATAT GTACAGAAAA TTATTGAGGA TTACAAGTTT
GAGCTAAATG CAGACGATGT AGTGGAAAAC ATTTCCATAG GAGCGAAGCA GCGTGTTGAG
ATTTTAAAAA TGCTTTATCG TAATGTAGAT ATTCTTATAT TCGACGAGCC TACTGCGGTT
TTGACTCCTC AGGAGGTGGA TGAGCTTTTA TTAAGCTTCA AGGAGCTTAA GAAGCAGGGA
AAGACAATTA TACTGATTAC TCACAAGCTG CGTGAGGTAA TGGAAGTCAG CGACAAGGTT
ATTGTCATAA AACGTGGTAA GGTAGTGGGA AGTAAGGCAA CCAAAGACAC AAATTCGGCT
GAAATAGCTA AAATGATGGT TGGCCGTGAA GTAATACTGA ATGTAAGCAA GGAAGATAAG
GATGTCAGGG AAAATAAGGT TGCCTATTCC GTAAGCAAAT TATCTACCCA GGATAACTTC
GGAAAGAAAG TTATTGAGGA TATAAGCTTC GAAATAAAAG AAGGAGAAAT TCTGGGCGTT
GCAGGGGTAG AAGGTAACGG ACAAAGTGAG CTTGTAAGAG TTCTTTCAGG ACTAATGGAA
TCAACGGAAG GCTCGGTACA CTTGTACGGT AAGGATATAA CCAATAAATG GCCAAGTAGC
CTGCGTGCAG CTGGCATTGG AATAGTTCCC GAAGACAGGT ATGCTCAGGG TTTGTGCAAG
GACATGACAA TCCTAGAGAA TATTATAGCC GGTTATCACA GGAACAAGAA AGTTTGCAAA
AATGGAATCA TGCTGAAAAA TGAAATTGAA GATACAGGTA ACAAGCTTAT AGAAAAATAT
GATATCAGAA TTGCTGAAAA GAACGGTAAT GTATCACAGC TGTCCGGGGG AAATGCCCAG
AAGATAATTG TGGCCAGAGA GTTCGATTCT GACCCAAAGG TACTCATAGT AAGCCAGCCT
ACCCGTGGTG TGGATATAGG CTCAATAGAA TTTATTCATA ATAAGATTCT GGACCTGAGA
AGTGAAAACA AAGCGATTTT ACTTGTTTCC AGTGAACTAA GCGAGATAAT GAACTTGAGT
GACAGGATAA TAGTTATGTA CAAAGGGCGT ATTGTAGGGG AAGTTGAAGG TAAAAAGGCA
GACAGCACTA AAATAGGGCT GCTAATGGCG GGACTATCCT TAGAATAA
|
|---|
| Protein sequence | MYAIEAVNLT KKYGDFVAND NINLSIGKGE ITAIVGENGA GKTTLMNMFF GLQRPTSGEL
LVNGKKVSFG SSLDAINCGL GMVHQHFKLV PSLTVFENIL LGVEISRKIN FSQKLKLGTP
IIDKKCEKKY VQKIIEDYKF ELNADDVVEN ISIGAKQRVE ILKMLYRNVD ILIFDEPTAV
LTPQEVDELL LSFKELKKQG KTIILITHKL REVMEVSDKV IVIKRGKVVG SKATKDTNSA
EIAKMMVGRE VILNVSKEDK DVRENKVAYS VSKLSTQDNF GKKVIEDISF EIKEGEILGV
AGVEGNGQSE LVRVLSGLME STEGSVHLYG KDITNKWPSS LRAAGIGIVP EDRYAQGLCK
DMTILENIIA GYHRNKKVCK NGIMLKNEIE DTGNKLIEKY DIRIAEKNGN VSQLSGGNAQ
KIIVAREFDS DPKVLIVSQP TRGVDIGSIE FIHNKILDLR SENKAILLVS SELSEIMNLS
DRIIVMYKGR IVGEVEGKKA DSTKIGLLMA GLSLE
|
|---|
| |