Gene Ccel_0971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0971 
Symbol 
ID7309802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1161983 
End bp1162912 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content37% 
IMG OID643607898 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002505313 
Protein GI220928404 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTTC TAATTACTGG TGGAGCGGGT TTTGTTGGTT GTCATATAGC CAAACAGCTT 
TTAGATGAAA ACAAAGGTGA GGTTATTATC TATGATAATT TAAGCAGCGG AAAGCTGCAA
AATATACCTA CTGGATGCCG TTTCATAGAG GGAGATATAA GAGACAGCAA AAAAATAGAA
GAAGTATTGG AAGGCGTTGA CGTGGTGTTT CATAATGCTG CATTTGTCAG TATAAGGAAC
AGCTATACCA TGCTCAAGGA AGAGATGGAT ATAAATTGCT ATGGAACTCA GAATATACTT
GAGGGCATGG TTAAGCAGAG AGTAAGGAAG ATTGTTTTTG CATCCTCTAT GGCTGCTTAT
GGATGGCCAA GACAGATTCC TATCACAGAA GACTGTGATT TGGCTCCAAT TTCTCCATAT
GGTTTTAGTA AAGCAAGGTG TGAGCTCTAC TGCAAGATAT TTGCCAAGAG ATTTGGTATA
TCGTATGTGA TACTAAGATA TTGCAATATA TATGGGATAA AACAAACTCT ATCCCCGTAT
GTAGGAGTAC TGACTACGTT TATAAACCAA GCTTTGAGCA GTCAACCTAT TACTGTAAAT
GGTGATGGAG AGCAAATTAA GGATTTTGTT AATGTTGAGG ATATTGCACA TGCTAATTTA
TTAGCGATGG AATATGAAAA AAACGACATC TTTAATATAG GAAGTGGGAT TAAAACCTCT
GTAAATCAAT TGGCTGATAT GGTATTAAGC AATTTTAAGG ATGGAAAGAA GATATATATG
CCATTGCCGG AGGGAGAAGT GGATAGCATT TGTGCGGATA TATCCAAGGC ACAAAACCTC
CTTGGCTATA AAGCGGAGGG TGATCTTGAG AAGTTGCTTC CTCAAATAAT AGAATGGTGG
AAAAACAACT GTTATGAAAA AATTTCTTAA
 
Protein sequence
MRFLITGGAG FVGCHIAKQL LDENKGEVII YDNLSSGKLQ NIPTGCRFIE GDIRDSKKIE 
EVLEGVDVVF HNAAFVSIRN SYTMLKEEMD INCYGTQNIL EGMVKQRVRK IVFASSMAAY
GWPRQIPITE DCDLAPISPY GFSKARCELY CKIFAKRFGI SYVILRYCNI YGIKQTLSPY
VGVLTTFINQ ALSSQPITVN GDGEQIKDFV NVEDIAHANL LAMEYEKNDI FNIGSGIKTS
VNQLADMVLS NFKDGKKIYM PLPEGEVDSI CADISKAQNL LGYKAEGDLE KLLPQIIEWW
KNNCYEKIS