Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0955 |
Symbol | |
ID | 7309788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1137381 |
End bp | 1138016 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643607883 |
Product | Accessory gene regulator B |
Protein accession | YP_002505298 |
Protein GI | 220928389 |
COG category | [K] Transcription [O] Posttranslational modification, protein turnover, chaperones [T] Signal transduction mechanisms |
COG ID | [COG4512] Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGACTTA TAAATAAATG GTCATATTCT TGTGCAAAGG GTTTGGCAAA TGTACTTGAC GAAAATCATC AAAAAAAAGC GGAATATTAT TTCGGCTTTC AGGTAGCCAT CGGCAGTATT GTAAAAACTG CCTTATTAGT AGCTGTCTCA ATGATTTTTG GCGTACTGAT TCCTGCCTTG ATAATATCCA TATCATTTGC ATTACTGCGA AAGGTAGCGG GAGGCTATCA TATGGATACA TATGGTAAAT GCTTGCTGGT TTCAATAGCA CTATTTGTTT TCGCAGCGTT GATTGCAAAG CATACTTACA GGTATTGGAG TATTGCATGG GTGATAATCT TGATAACCTT AACATTTACA ATAGGGCTTT ATGTATTGAT CAGGTATGCT CCAAGGGATA CTCCCAATAG ATTAATTACA GACCCCCAAG AAATAAGGAA ATTCAAGGCT TTATCCATTG CCTATATTTG TGTGTGGCTA GTGTTGGTTA CAGTACTAAC TATACTAGGA ATGAAAATGT ATACCATTTT ATTATGCTTT GGTGTATTGC AGGAATTATT CGCAATAACT CCAATAGGAC ATAAATTTTT TGACCGAATA AAATACGGTT TGGCCCCAAA ACAAAAGCCT TGCTAA
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Protein sequence | MRLINKWSYS CAKGLANVLD ENHQKKAEYY FGFQVAIGSI VKTALLVAVS MIFGVLIPAL IISISFALLR KVAGGYHMDT YGKCLLVSIA LFVFAALIAK HTYRYWSIAW VIILITLTFT IGLYVLIRYA PRDTPNRLIT DPQEIRKFKA LSIAYICVWL VLVTVLTILG MKMYTILLCF GVLQELFAIT PIGHKFFDRI KYGLAPKQKP C
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