Gene Ccel_0955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0955 
Symbol 
ID7309788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1137381 
End bp1138016 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content36% 
IMG OID643607883 
ProductAccessory gene regulator B 
Protein accessionYP_002505298 
Protein GI220928389 
COG category[K] Transcription
[O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms 
COG ID[COG4512] Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGACTTA TAAATAAATG GTCATATTCT TGTGCAAAGG GTTTGGCAAA TGTACTTGAC 
GAAAATCATC AAAAAAAAGC GGAATATTAT TTCGGCTTTC AGGTAGCCAT CGGCAGTATT
GTAAAAACTG CCTTATTAGT AGCTGTCTCA ATGATTTTTG GCGTACTGAT TCCTGCCTTG
ATAATATCCA TATCATTTGC ATTACTGCGA AAGGTAGCGG GAGGCTATCA TATGGATACA
TATGGTAAAT GCTTGCTGGT TTCAATAGCA CTATTTGTTT TCGCAGCGTT GATTGCAAAG
CATACTTACA GGTATTGGAG TATTGCATGG GTGATAATCT TGATAACCTT AACATTTACA
ATAGGGCTTT ATGTATTGAT CAGGTATGCT CCAAGGGATA CTCCCAATAG ATTAATTACA
GACCCCCAAG AAATAAGGAA ATTCAAGGCT TTATCCATTG CCTATATTTG TGTGTGGCTA
GTGTTGGTTA CAGTACTAAC TATACTAGGA ATGAAAATGT ATACCATTTT ATTATGCTTT
GGTGTATTGC AGGAATTATT CGCAATAACT CCAATAGGAC ATAAATTTTT TGACCGAATA
AAATACGGTT TGGCCCCAAA ACAAAAGCCT TGCTAA
 
Protein sequence
MRLINKWSYS CAKGLANVLD ENHQKKAEYY FGFQVAIGSI VKTALLVAVS MIFGVLIPAL 
IISISFALLR KVAGGYHMDT YGKCLLVSIA LFVFAALIAK HTYRYWSIAW VIILITLTFT
IGLYVLIRYA PRDTPNRLIT DPQEIRKFKA LSIAYICVWL VLVTVLTILG MKMYTILLCF
GVLQELFAIT PIGHKFFDRI KYGLAPKQKP C