Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0922 |
Symbol | |
ID | 7309760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1098275 |
End bp | 1100443 |
Gene Length | 2169 bp |
Protein Length | 722 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643607854 |
Product | DNA topoisomerase III |
Protein accession | YP_002505269 |
Protein GI | 220928360 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid [TIGR01057] DNA topoisomerase I, archaeal |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGTTTTA CATTAATATT AGCAGAAAAA CCTTCGGTAG CAAGAGATTT GGCAAAAGTC CTGAACTGCG GGCAAAATGC CAATGGCTAT ATAATGGGAA AAAAATATAT CGTAACCTGG GCCTTGGGAC ATCTTGTTAC CCTTGCAGAC CCTGAAGCTT ACGGCAACAA GTACAAGACA TGGAATCTGG AAGACCTGCC AATGCTGCCA AACAAAATGG AACTGGTAGT AATAAAGCAG ACTGCAAAAC AGTACGGAGT AGTCAGAGGT CTTTTGAACA GGGCCGATGT GGACGAGCTT GTAATAGCCA CTGATTCCGG GCGTGAAGGT GAGCTTGTAG CCAGATGGAT TATAATGAAG GCAGGATTTA AAAAGCCGAT AAAGCGTCTA TGGATTTCAT CCCAGACGGA CAAGGCCATA AAGGAAGGGT TTGCAAAATT AAGGCCTTCC AAGGAATACG ACAACCTATA CTATTCGGCA CAGAGCAGGG CAGAAGCCGA CTGGCTCATT GGTCTTAATG TCACAAGGGC ATTGACCTGC AAATACAATG CTCAGCTATC AGCAGGGAGA GTACAGACAC CTACACTTGC CATGATTGTA GAAAGAGAAG AGGAAATTCG TAAATTCAGG CCCAAGGACT ATTGGACAAT TTCCGCACAG TTTAACGGAT TTACGGTACA GTGGCAGGAT AGCAGAAACA ATCAGACCAG AACTTTCAAC AAAGAAGAGG CGGACGGAAT AGTAGCTAAA ATAACAGGAC AGATGGGTGA AGTAGTTGAG GTAAAAAAAG AAACTAAGAA AGAATTGCCT CCATTGGCTT ACGACCTGAC AGAGCTGCAA AGAGATGCAA ACAAAAAATT CTCATATTCA GCAAAACAAA CCCTTAACAT AATGCAGCGT CTTTATGAAT CACACAAGCT GGTTACGTAT CCAAGAACAG ATTCAAGGTA CATAACGGAT GACATTGTAC CTACCTTGAA CGAACGCTTG AAAAGCATAG CGGTGGGCCC TTATGCAAAG CTTGTACAGG GAGTTATGAG AAACAAACCA AGTGTTACAA AAAGGTTTGT GGATAACAGC AAGGTTACAG ACCACCATGC CATAATACCA ACAGAACAAT TTGTGGACTT ATTCTCACTG AATTCAGAAG AGAGAAATAT ATATGACCTT ATAGTAAAAA GATTTATTGC AGTACTAAGC AAGCCGTTTG AATATGAGCA GACTACAGTA AAGCTTGATA TAGCAGGAGA AAGTTTTTAT GCAAAAGGGA AAATTGTCAA ATCATCGGGC TGGAAAACAG TCTATGACGG TTTTGGAAAA CTTGATGAAG ACGATGAAGA TGATAATGAC CAGTCACTGC CGGATATCCA GAAGGGCCAT AAGGCAAAAG TTGTCGGACC TAAATCAATA AACGGAAAAA CAAAGCCACC CGCAAGGTAT ACTGAGGCCA CTTTACTTTC TGCAATGGAG CATCCGGGGA AATTTGTTGA CAACAAAGCG TTAAAGGAAG CCTTAGAAAG CACCAGCGGA CTTGGCACAC CAGCTACAAG AGCAGATATA ATAGAAAAGC TTTTTAATAC GTTTTATATA GAAAGAAAGG GTAAGGAAAT TTACCCTACC TCAAAGGGAA CTCAACTTAT TTCACTGGTT CCTACTGATT TGAAATCTCC TGAACTTACT GCAAAGTGGG AGCAGCAGCT TACCCTTATA AGTAAAGGTA AAGTCAATTC AAATGTGTTT GTAAATGATA TGAAAAAATA TGCAAGAAAA TTAGTGGGAG CGGTTATAGC AAGTTCGGAA CAGTTCAAAC ATGATAACGT AACCCGGGAA AAGTGTCCCG AATGTGGGAA ATACCTTCTG GAAGTAAACG GTAAAAAAGG CAAAATGCAT ATCTGTCCTG ACAGAGAATG TGGCTACAGA AAGTCTGTAA CCGTAATATC AAATGCCAGA TGCCCTGAAT GTCACAAGAA AATGGAAATC AGAGGAGAGG GAGAAAATAA GTCATTTTAC TGTTCATGCG GTTATAGGGA GAAGTTGGAC GCTTTTAAGA AACGTAAAGG TCAACAGGTT GATAAAAGGG AGGTTGCCAA ATTCATGAGG CAGCAGGAAA AGGACGAAAA CATAAACTCT GCACTTGCTG ATGCATTGGC AAAGTGGAAA AATAATTGA
|
Protein sequence | MGFTLILAEK PSVARDLAKV LNCGQNANGY IMGKKYIVTW ALGHLVTLAD PEAYGNKYKT WNLEDLPMLP NKMELVVIKQ TAKQYGVVRG LLNRADVDEL VIATDSGREG ELVARWIIMK AGFKKPIKRL WISSQTDKAI KEGFAKLRPS KEYDNLYYSA QSRAEADWLI GLNVTRALTC KYNAQLSAGR VQTPTLAMIV EREEEIRKFR PKDYWTISAQ FNGFTVQWQD SRNNQTRTFN KEEADGIVAK ITGQMGEVVE VKKETKKELP PLAYDLTELQ RDANKKFSYS AKQTLNIMQR LYESHKLVTY PRTDSRYITD DIVPTLNERL KSIAVGPYAK LVQGVMRNKP SVTKRFVDNS KVTDHHAIIP TEQFVDLFSL NSEERNIYDL IVKRFIAVLS KPFEYEQTTV KLDIAGESFY AKGKIVKSSG WKTVYDGFGK LDEDDEDDND QSLPDIQKGH KAKVVGPKSI NGKTKPPARY TEATLLSAME HPGKFVDNKA LKEALESTSG LGTPATRADI IEKLFNTFYI ERKGKEIYPT SKGTQLISLV PTDLKSPELT AKWEQQLTLI SKGKVNSNVF VNDMKKYARK LVGAVIASSE QFKHDNVTRE KCPECGKYLL EVNGKKGKMH ICPDRECGYR KSVTVISNAR CPECHKKMEI RGEGENKSFY CSCGYREKLD AFKKRKGQQV DKREVAKFMR QQEKDENINS ALADALAKWK NN
|
| |