| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0892 |
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| Symbol | |
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| ID | 7309734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 1068582 |
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| End bp | 1069634 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643607829 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_002505244 |
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| Protein GI | 220928335 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.388428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TAATATCACG TGTTTTAATG ATGGCAGCTA CGTTATCTGT CAGTTTTGCT
CTGACAGGCT GCGGGGGAGC TTCAAACGAC AAAATAACCC TTAAGGTATT CAACTGGGGT
GATTACATAG GAGAGGAGGT AATACAGAAA TTCGAAGATA AATATAACAT AAATGTTCAA
TATAGTATAT TTACAACAAA TGAAGATATG TATGTTAAGA TGAAGGCAGG CGGTGGTGAC
TATGATGTTG TTATCCCCTC TGATTACATG ATAAAGAAAA TGATAAATGA AGGTATGGTT
AAGAAAATAG ATTTAAACAA TATACCAAAC TACAAGTATA TTGACGACAA GTTCAAGAAT
CTTTCCTTTG ATCCCAACAA TGAGTACTCT GTTCCTTATA TGTGGGGTAC TGTAGGAATA
ATTTATAATA AAACAATGGT TAAGGAACCT GTTGACAGCT GGAATATACT GTGGGATAAG
AAATATGACA AACAGATATT CATGTTGGAC AGCCTTAGGG ATTCTATCGG AGTAACCTTG
AAAAAGCTGG GTTATTCCCT TAATACCAAA AACAAGGATG AACTTGAAAG AGCTAAGAAC
GAATTAATAA AGCAGAAGGA TATTGTACAG GCGTACGTTG GTGATGAAGT CAAGGATAAG
ATGATAATGG ACGAGGGAGC CATGGCTGTA GTCTGGTCCG GGGATGCAGT ATATATGAAA
AGCCAGAACA AGGACCTCGA ATATGTAATA CCAAAGGAAG GCAGCAATCT GTGGTTTGAT
TCCATGGTTA TACCAAGCAA CGCGAAGCAC CAGAAGGAAG CGGAGGACTT TATAAACTTT
ATGTGTGAAA CTGAAATCGC ACTTGAGAAT ACCAATTATA TAGGATACTC AACGCCACAA
ACAGAAGCAA AGAAAAAGGT TGCTCCTGCA TTATTGAAGG ATATTACAGC TTATCCAACC
GATGAACAAA TTAAGAATTG TGAAGTATTC ATTGATTTGG ACGCTTCTAT CAAGGATTAT
GACAAGATAT GGACTGAGAT TACCTCCAGA TAA
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| Protein sequence | MKKIISRVLM MAATLSVSFA LTGCGGASND KITLKVFNWG DYIGEEVIQK FEDKYNINVQ
YSIFTTNEDM YVKMKAGGGD YDVVIPSDYM IKKMINEGMV KKIDLNNIPN YKYIDDKFKN
LSFDPNNEYS VPYMWGTVGI IYNKTMVKEP VDSWNILWDK KYDKQIFMLD SLRDSIGVTL
KKLGYSLNTK NKDELERAKN ELIKQKDIVQ AYVGDEVKDK MIMDEGAMAV VWSGDAVYMK
SQNKDLEYVI PKEGSNLWFD SMVIPSNAKH QKEAEDFINF MCETEIALEN TNYIGYSTPQ
TEAKKKVAPA LLKDITAYPT DEQIKNCEVF IDLDASIKDY DKIWTEITSR
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