Gene Ccel_0803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0803 
Symbol 
ID7309653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp923982 
End bp924536 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content38% 
IMG OID643607745 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002505161 
Protein GI220928252 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCGCTTA CGGATGCAGA GCTGGTGTCT CAGTGCGTGA ATGGTGATAG CAGTGCATTT 
GAGGAAATAG TTATCAGATA TAAGAGGCTG GTCTACAGCG TTGTATACAA AATGATATCG
GACAAGGAAG AGGTACATGA CGTATGTCAG GAGGTTTTTA TAAGACTTTA CCGTTCTCTT
GATAAGTACA ATCCGGAATT TAAAATGTCT ACATGGATTG TGAAAATTAC CTCCAATTTA
TGTCTGGATA CCCTCAGAAA GAAAAAACAG GACACTGTCA CGCTGGACGA TGCAATCGGA
GTTTCAAGTG AGATTGATAC ACCTGAGGAA GCGTTAATAA AGCATCAAAG ATCACAATTA
ATAAAGAAGG CTGTGGATGA ACTGCCGGAC AAATATAAAG TATTAATAGT ACTCTTTCAC
AACCGAGGAA TGTCCTATGA AGAAATGACA AAAATATTAA ACGAACCAAT GTCAATAATT
AAGAATCGGC TATACAGAGC AAGACTTATG TTAAAAGAAA AGCTTGAGAG TGCAAGAAAG
GAGGAGGTAT TATGA
 
Protein sequence
MALTDAELVS QCVNGDSSAF EEIVIRYKRL VYSVVYKMIS DKEEVHDVCQ EVFIRLYRSL 
DKYNPEFKMS TWIVKITSNL CLDTLRKKKQ DTVTLDDAIG VSSEIDTPEE ALIKHQRSQL
IKKAVDELPD KYKVLIVLFH NRGMSYEEMT KILNEPMSII KNRLYRARLM LKEKLESARK
EEVL