Gene Ccel_0743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0743 
Symbol 
ID7309596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp866523 
End bp867272 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content36% 
IMG OID643607681 
Productcell wall hydrolase/autolysin 
Protein accessionYP_002505101 
Protein GI220928192 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID[TIGR02883] N-acetylmuramoyl-L-alanine amidase CwlD 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.508174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAGT TAAGAATTAT TTTTTTAAAT CGAAGAATTT TACTTATTGC AGCAGTTTTA 
ATAATTGCTA TATTAGCTCT ACCAGTTATT TTGTTCATCG AAATATCTAC CTCAGATACA
TTTACAGATC CCAAAAGCGG TGTAATAGTT ATTGATCCGG GGCATGGAGG AATCGACGGG
GGAACAAGCA GGGACGGAGT ATTGGAAAAA GAAATAAATC TTGATATAGC TAAAAAGCTA
AAATCCATTC TTATGGAACG GGGATATAAA ATAATAATGA CAAGGGAAGA AGATGTTTCC
CTTGAAAGTC TTGATAATAG CCGAAAATCT AGGCACTTAA GGGATTTGAC AGCTAGGGCC
AATATTATTA ATAATAGCAA TGCACAACTG TTTCTAAGCA TACATGTTAA CTGCAATATA
AAAAAGCCTG CGACTGATGG TGCAATAGTC TTTTTCTGCA AAAAGTATGA GCAGAATAGA
ACGTTGGCCT TATGTATTCA GCGAGTATTA AACAACATGG TTGTAGACGG GAAAAAACGA
AACGTTCATG ACCCGGTACA GGCAAAATAT TATGTTCTTA ACTATACTAA TATACCCGGA
GTTATAGTTG AAACGGGTTT TATTTCAAAC GAGGAAGAAA GGCAGAAATT AGCAAAGGGC
ACCTTTCGAC AGGAGCTCGC AAAATCAATA GCAAAGGGAA TAGAACAATA TTTAGATGAA
TCAAGTAAGG TATCGACTCC TGCATCATAA
 
Protein sequence
MRKLRIIFLN RRILLIAAVL IIAILALPVI LFIEISTSDT FTDPKSGVIV IDPGHGGIDG 
GTSRDGVLEK EINLDIAKKL KSILMERGYK IIMTREEDVS LESLDNSRKS RHLRDLTARA
NIINNSNAQL FLSIHVNCNI KKPATDGAIV FFCKKYEQNR TLALCIQRVL NNMVVDGKKR
NVHDPVQAKY YVLNYTNIPG VIVETGFISN EEERQKLAKG TFRQELAKSI AKGIEQYLDE
SSKVSTPAS