Gene Ccel_0687 details

Gene Information

• Locus tag: Ccel_0687
• Symbol: rnc
• ID: 7312135
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium cellulolyticum H10
• Kingdom: Bacteria
• Replicon accession: NC_011898
• Strand: +
• Start bp: 791833
• End bp: 792543
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 643607627
• Product: ribonuclease III
• Protein accession: YP_002505047
• Protein GI: 220928138
• COG category: [K] Transcription
• COG ID: [COG0571] dsRNA-specific ribonuclease
• TIGRFAM ID: [TIGR02191] ribonuclease III, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGAAA TTCGTTATGA TAATAGAATA TCTGAACTTG AAGATATTAT AGGATACACT 
TTTAAAAATA AAGATATTAT TTTTGCTGCT GTTACCCACA GCTCATATGC AAATGAAAAG 
AAGTCAAGGA AGTTGAAATA TAATGAGAGA CTTGAATTCC TTGGAGATTC GGTCCTAGGC 
CTTACAATAA GTGAATATTT ATTCCAGAAA AAGCCAAACC TACCTGAGGG GGAATTGTCA 
GTAACAAGAG CTAAAATTGT ATGTGAAAAC TCATTATCCC AGTGTGCTAC TGACATAGGT 
CTTGGAAAAT ATCTATTACT CGGAAAGGGA GAAGAACTGT CAGGGGGCAG AGAAAAGATT 
TCTTTGCTTT CAGATGCATT TGAGGCATTG ATAGGTGCAC TATACATTGA CGGTGGGTTT 
GAAACTGCCA AATCATTTAT TTACAGATAT ATGGATAAAA TCATAAAGTC ATGTATTGAA 
GGCAAACTGT TTTACGATTA TAAGACGCAG CTGCAGGAAT TGGTTCAGCA AAACGGAGAA 
CAACAGATTA CTTATAGTGT TACCGACCAA TTTGGCCCTG ACCATAACAA GACATTTATT 
ACAGAAGTAA AGATAAATGG TGCTATTCAG GGGCGGGGAA AAGGACATTC TAAAAAAGAA 
GCTGAACAAA ATGCTGCAAA GAATGCCTTA AATAATCTAA AAACAAATTA G 

 

Protein sequence

MAEIRYDNRI SELEDIIGYT FKNKDIIFAA VTHSSYANEK KSRKLKYNER LEFLGDSVLG 
LTISEYLFQK KPNLPEGELS VTRAKIVCEN SLSQCATDIG LGKYLLLGKG EELSGGREKI 
SLLSDAFEAL IGALYIDGGF ETAKSFIYRY MDKIIKSCIE GKLFYDYKTQ LQELVQQNGE 
QQITYSVTDQ FGPDHNKTFI TEVKINGAIQ GRGKGHSKKE AEQNAAKNAL NNLKTN